Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CROCCP3Q8IVE0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 AL136379.1-201ENST00000623471 2642 ntBASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 KRT8P8-201ENST00000434750 1448 ntBASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CROCCP3Q8IVE0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 REXO1L9P-201ENST00000604264 2108 ntBASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CROCCP3Q8IVE0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CROCCP3Q8IVE0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms