Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 NAPSB-206ENST00000562112 1266 ntBASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CPNE8Q86YQ8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 PP12613-201ENST00000424958 2230 ntBASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 AC132938.6-201ENST00000623828 1655 ntBASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE8Q86YQ8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE8Q86YQ8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 GNAS-203ENST00000306120 1878 ntBASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 KRT8P7-201ENST00000533003 1432 ntBASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE8Q86YQ8 AC100803.2-201ENST00000562459 1963 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms