Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 AL355802.2-201ENST00000402069 882 ntBASIC18.87■□□□□ 0.61
CCDC25Q86WR0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 AC004951.3-201ENST00000418645 1148 ntBASIC18.87■□□□□ 0.61
CCDC25Q86WR0 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC25Q86WR0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 AP002982.1-201ENST00000492365 877 ntBASIC18.86■□□□□ 0.61
CCDC25Q86WR0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC25Q86WR0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.85■□□□□ 0.61
CCDC25Q86WR0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 AC099398.1-201ENST00000567919 2776 ntBASIC18.85■□□□□ 0.61
CCDC25Q86WR0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 RPS2P4-201ENST00000476944 856 ntBASIC18.85■□□□□ 0.61
CCDC25Q86WR0 AC026366.1-201ENST00000488803 879 ntBASIC18.85■□□□□ 0.61
CCDC25Q86WR0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC25Q86WR0 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC25Q86WR0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms