Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 MCCD1P1-208ENST00000445732 328 ntBASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 UBE2SP1-201ENST00000450587 669 ntBASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 MYLKP1-201ENST00000509077 1580 ntBASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 FZD10-202ENST00000539839 3282 ntBASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 AC096733.2-201ENST00000609937 1394 ntBASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL55Q7Z7F7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC11.77□□□□□ -0.52
MRPL55Q7Z7F7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 AP000593.1-201ENST00000393668 712 ntBASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 MFAP1P1-201ENST00000442257 1255 ntBASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 NUDT16P1-203ENST00000513809 620 ntBASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 AC008556.1-201ENST00000610908 2040 ntBASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC11.77□□□□□ -0.53
MRPL55Q7Z7F7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 NOC2LP1-202ENST00000452600 2235 ntBASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 AC063926.3-201ENST00000624734 5658 ntBASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
MRPL55Q7Z7F7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms