Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NUP54Q7Z3B4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NUP54Q7Z3B4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NUP54Q7Z3B4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NUP54Q7Z3B4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 LINC01311-201ENST00000565162 1445 ntBASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 HBZP1-201ENST00000354915 429 ntBASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 KRT18P35-201ENST00000510488 1269 ntBASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 AC087388.1-201ENST00000571370 1112 ntBASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 AL136038.4-201ENST00000603606 1261 ntBASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 HYMAI.1-201ENST00000620949 238 ntBASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NUP54Q7Z3B4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AL391807.1-203ENST00000604392 2365 ntBASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ARMC10P1-201ENST00000313754 855 ntBASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AL031133.1-201ENST00000406807 723 ntBASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AC092597.1-201ENST00000487352 616 ntBASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AC079602.3-201ENST00000623931 403 ntBASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NUP54Q7Z3B4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 HLA-F-220ENST00000434407 884 ntBASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.87■□□□□ 0.29
NUP54Q7Z3B4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms