Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 HOMER2P1-201ENST00000455653 964 ntBASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 AC011558.1-201ENST00000623459 338 ntBASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 AL023973.1-201ENST00000624619 620 ntBASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHMP1BQ7LBR1 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP1BQ7LBR1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP1BQ7LBR1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP1BQ7LBR1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHMP1BQ7LBR1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 RCC2P3-201ENST00000418112 1537 ntBASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 AL512353.2-201ENST00000448759 1962 ntBASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 KRT18P35-201ENST00000510488 1269 ntBASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 AC022616.7-201ENST00000525383 220 ntBASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 WWOX-216ENST00000569818 525 ntBASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 NTF6B-201ENST00000591913 560 ntBASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 AL445228.2-201ENST00000605589 952 ntBASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHMP1BQ7LBR1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 AC036111.1-201ENST00000533973 1582 ntBASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 PKD1P5-201ENST00000532415 10291 ntBASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 AC063952.2-201ENST00000498792 1227 ntBASIC16.82■□□□□ 0.28
CHMP1BQ7LBR1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms