Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 MIR564-202ENST00000385049 94 ntBASIC17.13■□□□□ 0.33
RTL4Q6ZR62 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.13■□□□□ 0.33
RTL4Q6ZR62 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 AC068587.9-201ENST00000641814 219 ntBASIC17.13■□□□□ 0.33
RTL4Q6ZR62 FZD10-202ENST00000539839 3282 ntBASIC17.13■□□□□ 0.33
RTL4Q6ZR62 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.13■□□□□ 0.33
RTL4Q6ZR62 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 KRT18P23-201ENST00000435622 1283 ntBASIC17.12■□□□□ 0.33
RTL4Q6ZR62 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 AL671277.2-201ENST00000458060 996 ntBASIC17.12■□□□□ 0.33
RTL4Q6ZR62 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL4Q6ZR62 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 AL031133.1-201ENST00000406807 723 ntBASIC17.11■□□□□ 0.33
RTL4Q6ZR62 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 KRT18P38-201ENST00000449496 1282 ntBASIC17.11■□□□□ 0.33
RTL4Q6ZR62 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL4Q6ZR62 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 AC034236.2-201ENST00000606662 1610 ntBASIC17.1■□□□□ 0.33
RTL4Q6ZR62 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL4Q6ZR62 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms