Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 AC010240.3-201ENST00000607688 395 ntBASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NHLRC1Q6VVB1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
NHLRC1Q6VVB1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
NHLRC1Q6VVB1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.39■□□□□ 0.22
NHLRC1Q6VVB1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
NHLRC1Q6VVB1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 AC024243.1-201ENST00000609234 778 ntBASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 AC009102.3-201ENST00000623118 1491 ntBASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 ABALON-201ENST00000629058 1903 ntBASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
NHLRC1Q6VVB1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 HCG11-201ENST00000411553 5696 ntBASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NHLRC1Q6VVB1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.37■□□□□ 0.21
NHLRC1Q6VVB1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms