Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAF7Q6Q0C0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.84■□□□□ 0.77
TRAF7Q6Q0C0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 LINC00602-201ENST00000629776 2065 ntBASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 IGHV3-22-201ENST00000520721 359 ntBASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAF7Q6Q0C0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAF7Q6Q0C0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 PMS2P7-201ENST00000506558 1336 ntBASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 PGAM5P1-201ENST00000518923 814 ntBASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAF7Q6Q0C0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 ABCD1P5-201ENST00000445663 754 ntBASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 AC092865.5-201ENST00000545435 363 ntBASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 AC145285.3-201ENST00000564603 959 ntBASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
TRAF7Q6Q0C0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.8■□□□□ 0.76
TRAF7Q6Q0C0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms