Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCRAQ6ISU1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 AC138761.1-201ENST00000584393 385 ntBASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 AC093512.1-201ENST00000617969 520 ntBASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 FP475955.4-201ENST00000623131 1990 ntBASIC18.72■□□□□ 0.59
PTCRAQ6ISU1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 PRSS29P-201ENST00000440800 595 ntBASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 GPR89P-201ENST00000407924 1495 ntBASIC18.71■□□□□ 0.59
PTCRAQ6ISU1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PTCRAQ6ISU1 LINC00602-201ENST00000629776 2065 ntBASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
PTCRAQ6ISU1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PTCRAQ6ISU1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PTCRAQ6ISU1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms