Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCNA1P78396 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCNA1P78396 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.71■□□□□ 0.91
CCNA1P78396 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCNA1P78396 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.71■□□□□ 0.91
CCNA1P78396 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.71■□□□□ 0.91
CCNA1P78396 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCNA1P78396 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCNA1P78396 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCNA1P78396 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.71■□□□□ 0.91
CCNA1P78396 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 HLA-J-201ENST00000462773 1622 ntBASIC20.71■□□□□ 0.91
CCNA1P78396 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCNA1P78396 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.7■□□□□ 0.91
CCNA1P78396 AL356309.3-201ENST00000624132 1934 ntBASIC20.7■□□□□ 0.91
CCNA1P78396 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.7■□□□□ 0.9
CCNA1P78396 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCNA1P78396 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.7■□□□□ 0.9
CCNA1P78396 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.7■□□□□ 0.9
CCNA1P78396 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.7■□□□□ 0.9
CCNA1P78396 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCNA1P78396 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNA1P78396 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNA1P78396 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.7■□□□□ 0.9
CCNA1P78396 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCNA1P78396 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.7■□□□□ 0.9
CCNA1P78396 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.7■□□□□ 0.9
CCNA1P78396 AC145285.3-201ENST00000564603 959 ntBASIC20.7■□□□□ 0.9
CCNA1P78396 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNA1P78396 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCNA1P78396 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCNA1P78396 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCNA1P78396 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCNA1P78396 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
CCNA1P78396 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCNA1P78396 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.7■□□□□ 0.9
CCNA1P78396 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.69■□□□□ 0.9
CCNA1P78396 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.69■□□□□ 0.9
CCNA1P78396 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.69■□□□□ 0.9
CCNA1P78396 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.69■□□□□ 0.9
CCNA1P78396 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.69■□□□□ 0.9
CCNA1P78396 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.69■□□□□ 0.9
CCNA1P78396 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.69■□□□□ 0.9
CCNA1P78396 SART3-203ENST00000546611 1184 ntBASIC20.69■□□□□ 0.9
CCNA1P78396 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.69■□□□□ 0.9
CCNA1P78396 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.69■□□□□ 0.9
CCNA1P78396 AC027601.4-201ENST00000611259 610 ntBASIC20.69■□□□□ 0.9
CCNA1P78396 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCNA1P78396 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.69■□□□□ 0.9
CCNA1P78396 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.69■□□□□ 0.9
CCNA1P78396 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCNA1P78396 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.69■□□□□ 0.9
CCNA1P78396 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.68■□□□□ 0.9
CCNA1P78396 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCNA1P78396 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.68■□□□□ 0.9
CCNA1P78396 RPS2P1-201ENST00000434010 821 ntBASIC20.68■□□□□ 0.9
CCNA1P78396 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 IGHV3-22-201ENST00000520721 359 ntBASIC20.68■□□□□ 0.9
CCNA1P78396 OR7E14P-202ENST00000530490 1290 ntBASIC20.68■□□□□ 0.9
CCNA1P78396 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.68■□□□□ 0.9
CCNA1P78396 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.68■□□□□ 0.9
CCNA1P78396 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.68■□□□□ 0.9
CCNA1P78396 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.68■□□□□ 0.9
CCNA1P78396 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 AL139288.1-201ENST00000623748 933 ntBASIC20.68■□□□□ 0.9
CCNA1P78396 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.68■□□□□ 0.9
CCNA1P78396 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCNA1P78396 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCNA1P78396 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCNA1P78396 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.68■□□□□ 0.9
CCNA1P78396 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCNA1P78396 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNA1P78396 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms