Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP1P78357 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP1P78357 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 BCRP1-201ENST00000444246 691 ntBASIC21.66■■□□□ 1.06
CNTNAP1P78357 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.66■■□□□ 1.06
CNTNAP1P78357 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP1P78357 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 MCCD1P2-201ENST00000423228 335 ntBASIC21.65■■□□□ 1.06
CNTNAP1P78357 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 AC068472.1-201ENST00000474589 881 ntBASIC21.65■■□□□ 1.06
CNTNAP1P78357 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 AL096865.1-201ENST00000606796 927 ntBASIC21.65■■□□□ 1.06
CNTNAP1P78357 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP1P78357 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CNTNAP1P78357 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP1P78357 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP1P78357 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 MIR4469-201ENST00000583919 79 ntBASIC21.64■■□□□ 1.06
CNTNAP1P78357 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 AC025062.2-201ENST00000605477 670 ntBASIC21.64■■□□□ 1.06
CNTNAP1P78357 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.64■■□□□ 1.06
CNTNAP1P78357 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNTNAP1P78357 TP73-AS1-210ENST00000637775 1455 ntBASIC21.64■■□□□ 1.06
CNTNAP1P78357 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP1P78357 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CNTNAP1P78357 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP1P78357 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP1P78357 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNTNAP1P78357 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP1P78357 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP1P78357 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP1P78357 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 CNN2P11-201ENST00000429351 262 ntBASIC21.63■■□□□ 1.05
CNTNAP1P78357 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP1P78357 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP1P78357 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP1P78357 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.63■■□□□ 1.05
CNTNAP1P78357 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNTNAP1P78357 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP1P78357 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 ALG1L5P-201ENST00000482043 771 ntBASIC21.62■■□□□ 1.05
CNTNAP1P78357 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP1P78357 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNTNAP1P78357 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CNTNAP1P78357 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms