Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DUX4L16-201ENST00000555130 1264 ntBASIC15.69■□□□□ 0.1
AP3S2P59780 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
AP3S2P59780 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3S2P59780 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.69■□□□□ 0.1
AP3S2P59780 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.69■□□□□ 0.1
AP3S2P59780 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.69■□□□□ 0.1
AP3S2P59780 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
AP3S2P59780 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
AP3S2P59780 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
AP3S2P59780 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
AP3S2P59780 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
AP3S2P59780 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
AP3S2P59780 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
AP3S2P59780 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP3S2P59780 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP3S2P59780 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
AP3S2P59780 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
AP3S2P59780 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
AP3S2P59780 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.67■□□□□ 0.1
AP3S2P59780 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
AP3S2P59780 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
AP3S2P59780 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.67■□□□□ 0.1
AP3S2P59780 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.67■□□□□ 0.1
AP3S2P59780 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
AP3S2P59780 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.67■□□□□ 0.1
AP3S2P59780 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.67■□□□□ 0.1
AP3S2P59780 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.67■□□□□ 0.1
AP3S2P59780 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP3S2P59780 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
AP3S2P59780 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.66■□□□□ 0.1
AP3S2P59780 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP3S2P59780 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
AP3S2P59780 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms