Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
GFERP55789 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.4■□□□□ 0.38
GFERP55789 AC096582.2-201ENST00000510860 516 ntBASIC17.4■□□□□ 0.38
GFERP55789 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GFERP55789 AC005336.2-201ENST00000593183 939 ntBASIC17.4■□□□□ 0.38
GFERP55789 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GFERP55789 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.4■□□□□ 0.38
GFERP55789 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.4■□□□□ 0.38
GFERP55789 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
GFERP55789 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GFERP55789 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
GFERP55789 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
GFERP55789 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GFERP55789 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
GFERP55789 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
GFERP55789 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GFERP55789 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.39■□□□□ 0.37
GFERP55789 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 AKR1C7P-201ENST00000305623 895 ntBASIC17.39■□□□□ 0.37
GFERP55789 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GFERP55789 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GFERP55789 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.39■□□□□ 0.37
GFERP55789 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.39■□□□□ 0.37
GFERP55789 KRT16P4-201ENST00000453883 522 ntBASIC17.39■□□□□ 0.37
GFERP55789 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.39■□□□□ 0.37
GFERP55789 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.39■□□□□ 0.37
GFERP55789 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.39■□□□□ 0.37
GFERP55789 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
GFERP55789 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GFERP55789 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.39■□□□□ 0.37
GFERP55789 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.39■□□□□ 0.37
GFERP55789 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GFERP55789 KRT8P10-201ENST00000450021 1447 ntBASIC17.38■□□□□ 0.37
GFERP55789 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.38■□□□□ 0.37
GFERP55789 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 GMCL1P1-201ENST00000463439 1581 ntBASIC17.38■□□□□ 0.37
GFERP55789 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
GFERP55789 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.38■□□□□ 0.37
GFERP55789 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.38■□□□□ 0.37
GFERP55789 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
GFERP55789 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
GFERP55789 FDX1P1-201ENST00000449115 551 ntBASIC17.38■□□□□ 0.37
GFERP55789 AC009078.2-202ENST00000463353 338 ntBASIC17.38■□□□□ 0.37
GFERP55789 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.38■□□□□ 0.37
GFERP55789 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.38■□□□□ 0.37
GFERP55789 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.38■□□□□ 0.37
GFERP55789 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.38■□□□□ 0.37
GFERP55789 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.38■□□□□ 0.37
GFERP55789 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.38■□□□□ 0.37
GFERP55789 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.38■□□□□ 0.37
GFERP55789 AC009154.2-201ENST00000621177 724 ntBASIC17.38■□□□□ 0.37
GFERP55789 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
GFERP55789 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.38■□□□□ 0.37
GFERP55789 ESPNP-201ENST00000270691 2015 ntBASIC17.38■□□□□ 0.37
GFERP55789 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GFERP55789 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms