Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
FOXG1P55316 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXG1P55316 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXG1P55316 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
FOXG1P55316 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXG1P55316 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXG1P55316 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXG1P55316 AL353692.3-201ENST00000407031 1396 ntBASIC15.99■□□□□ 0.15
FOXG1P55316 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXG1P55316 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FOXG1P55316 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
FOXG1P55316 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXG1P55316 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
FOXG1P55316 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 KRT89P-201ENST00000620027 1478 ntBASIC15.98■□□□□ 0.15
FOXG1P55316 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 LINC00602-201ENST00000629776 2065 ntBASIC15.98■□□□□ 0.15
FOXG1P55316 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.98■□□□□ 0.15
FOXG1P55316 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.98■□□□□ 0.15
FOXG1P55316 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.98■□□□□ 0.15
FOXG1P55316 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 BX276092.5-203ENST00000456199 560 ntBASIC15.98■□□□□ 0.15
FOXG1P55316 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.98■□□□□ 0.15
FOXG1P55316 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 KRT8P26-201ENST00000534154 1276 ntBASIC15.98■□□□□ 0.15
FOXG1P55316 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.98■□□□□ 0.15
FOXG1P55316 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 AL121672.3-201ENST00000608644 468 ntBASIC15.98■□□□□ 0.15
FOXG1P55316 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
FOXG1P55316 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
FOXG1P55316 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.98■□□□□ 0.15
FOXG1P55316 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FOXG1P55316 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
FOXG1P55316 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 AC093677.2-201ENST00000600169 1863 ntBASIC15.97■□□□□ 0.15
FOXG1P55316 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 TSSC2-201ENST00000450217 709 ntBASIC15.97■□□□□ 0.15
FOXG1P55316 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
FOXG1P55316 NPAP1P7-201ENST00000613027 823 ntBASIC15.97■□□□□ 0.15
FOXG1P55316 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
FOXG1P55316 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXG1P55316 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 NEFHP1-201ENST00000412845 2629 ntBASIC15.97■□□□□ 0.15
FOXG1P55316 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXG1P55316 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXG1P55316 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXG1P55316 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXG1P55316 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
FOXG1P55316 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXG1P55316 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXG1P55316 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXG1P55316 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms