Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CLCN3P51790 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20■□□□□ 0.79
CLCN3P51790 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20■□□□□ 0.79
CLCN3P51790 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20■□□□□ 0.79
CLCN3P51790 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
CLCN3P51790 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20■□□□□ 0.79
CLCN3P51790 FAAHP1-202ENST00000446499 1238 ntBASIC20■□□□□ 0.79
CLCN3P51790 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20■□□□□ 0.79
CLCN3P51790 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20■□□□□ 0.79
CLCN3P51790 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 AC005336.2-201ENST00000593183 939 ntBASIC20■□□□□ 0.79
CLCN3P51790 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20■□□□□ 0.79
CLCN3P51790 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20■□□□□ 0.79
CLCN3P51790 AL031008.1-201ENST00000619963 541 ntBASIC20■□□□□ 0.79
CLCN3P51790 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20■□□□□ 0.79
CLCN3P51790 ESPNP-201ENST00000270691 2015 ntBASIC20■□□□□ 0.79
CLCN3P51790 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLCN3P51790 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CLCN3P51790 GMCL1P1-201ENST00000463439 1581 ntBASIC20■□□□□ 0.79
CLCN3P51790 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLCN3P51790 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 AC079781.3-201ENST00000449110 356 ntBASIC19.99■□□□□ 0.79
CLCN3P51790 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.99■□□□□ 0.79
CLCN3P51790 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.99■□□□□ 0.79
CLCN3P51790 LINC01711-201ENST00000598340 967 ntBASIC19.99■□□□□ 0.79
CLCN3P51790 AC009154.2-201ENST00000621177 724 ntBASIC19.99■□□□□ 0.79
CLCN3P51790 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLCN3P51790 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
CLCN3P51790 AC098818.2-201ENST00000564925 2320 ntBASIC19.99■□□□□ 0.79
CLCN3P51790 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.99■□□□□ 0.79
CLCN3P51790 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLCN3P51790 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.99■□□□□ 0.79
CLCN3P51790 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN3P51790 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN3P51790 MTCL1P1-201ENST00000446207 792 ntBASIC19.98■□□□□ 0.79
CLCN3P51790 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.98■□□□□ 0.79
CLCN3P51790 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.98■□□□□ 0.79
CLCN3P51790 AC096582.2-201ENST00000510860 516 ntBASIC19.98■□□□□ 0.79
CLCN3P51790 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCN3P51790 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCN3P51790 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCN3P51790 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CLCN3P51790 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.98■□□□□ 0.79
CLCN3P51790 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCN3P51790 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCN3P51790 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCN3P51790 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
CLCN3P51790 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCN3P51790 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCN3P51790 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms