Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.87■□□□□ 0.13
HCFC1P51610 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HCFC1P51610 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
HCFC1P51610 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.86■□□□□ 0.13
HCFC1P51610 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HCFC1P51610 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.86■□□□□ 0.13
HCFC1P51610 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HCFC1P51610 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.86■□□□□ 0.13
HCFC1P51610 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.86■□□□□ 0.13
HCFC1P51610 AC012640.2-201ENST00000561606 901 ntBASIC15.86■□□□□ 0.13
HCFC1P51610 MIR5100-201ENST00000579544 119 ntBASIC15.86■□□□□ 0.13
HCFC1P51610 AC140113.2-201ENST00000604370 208 ntBASIC15.86■□□□□ 0.13
HCFC1P51610 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.86■□□□□ 0.13
HCFC1P51610 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.86■□□□□ 0.13
HCFC1P51610 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.86■□□□□ 0.13
HCFC1P51610 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
HCFC1P51610 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.86■□□□□ 0.13
HCFC1P51610 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.86■□□□□ 0.13
HCFC1P51610 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HCFC1P51610 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1P51610 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 MIR149-201ENST00000384879 89 ntBASIC15.85■□□□□ 0.13
HCFC1P51610 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.85■□□□□ 0.13
HCFC1P51610 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 AC034105.1-201ENST00000563488 319 ntBASIC15.85■□□□□ 0.13
HCFC1P51610 AC114341.1-201ENST00000618070 349 ntBASIC15.85■□□□□ 0.13
HCFC1P51610 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.85■□□□□ 0.13
HCFC1P51610 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.85■□□□□ 0.13
HCFC1P51610 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 INTS4P1-201ENST00000438455 1935 ntBASIC15.85■□□□□ 0.13
HCFC1P51610 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.85■□□□□ 0.13
HCFC1P51610 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.85■□□□□ 0.13
HCFC1P51610 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.85■□□□□ 0.13
HCFC1P51610 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1P51610 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 AP001269.4-201ENST00000609611 512 ntBASIC15.85■□□□□ 0.13
HCFC1P51610 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.85■□□□□ 0.13
HCFC1P51610 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1P51610 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 AC099343.3-201ENST00000605834 2503 ntBASIC15.84■□□□□ 0.13
HCFC1P51610 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
HCFC1P51610 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.84■□□□□ 0.13
HCFC1P51610 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 BX842568.4-201ENST00000421222 227 ntBASIC15.84■□□□□ 0.13
HCFC1P51610 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.84■□□□□ 0.13
HCFC1P51610 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.84■□□□□ 0.13
HCFC1P51610 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 AC112777.1-201ENST00000540175 1423 ntBASIC15.84■□□□□ 0.13
HCFC1P51610 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.84■□□□□ 0.13
HCFC1P51610 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.84■□□□□ 0.13
HCFC1P51610 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.84■□□□□ 0.13
HCFC1P51610 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.84■□□□□ 0.13
HCFC1P51610 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HCFC1P51610 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HCFC1P51610 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.84■□□□□ 0.13
HCFC1P51610 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms