Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK2P49760 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK2P49760 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK2P49760 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLK2P49760 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLK2P49760 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK2P49760 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK2P49760 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 KRT18P1-202ENST00000452408 1331 ntBASIC20.63■□□□□ 0.89
CLK2P49760 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLK2P49760 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLK2P49760 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.63■□□□□ 0.89
CLK2P49760 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.63■□□□□ 0.89
CLK2P49760 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.63■□□□□ 0.89
CLK2P49760 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
CLK2P49760 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CLK2P49760 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK2P49760 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CLK2P49760 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLK2P49760 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.63■□□□□ 0.89
CLK2P49760 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLK2P49760 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.62■□□□□ 0.89
CLK2P49760 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK2P49760 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.62■□□□□ 0.89
CLK2P49760 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.62■□□□□ 0.89
CLK2P49760 DUTP2-201ENST00000519164 463 ntBASIC20.62■□□□□ 0.89
CLK2P49760 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK2P49760 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK2P49760 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK2P49760 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLK2P49760 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CLK2P49760 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLK2P49760 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLK2P49760 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.62■□□□□ 0.89
CLK2P49760 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK2P49760 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CLK2P49760 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 AC091607.1-201ENST00000490318 1060 ntBASIC20.61■□□□□ 0.89
CLK2P49760 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK2P49760 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.61■□□□□ 0.89
CLK2P49760 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CLK2P49760 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CLK2P49760 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.61■□□□□ 0.89
CLK2P49760 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CLK2P49760 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.61■□□□□ 0.89
CLK2P49760 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLK2P49760 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.6■□□□□ 0.89
CLK2P49760 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.6■□□□□ 0.89
CLK2P49760 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.6■□□□□ 0.89
CLK2P49760 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLK2P49760 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CLK2P49760 AP005901.3-202ENST00000581653 237 ntBASIC20.6■□□□□ 0.89
CLK2P49760 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.6■□□□□ 0.89
CLK2P49760 AC092329.2-201ENST00000598402 547 ntBASIC20.6■□□□□ 0.89
CLK2P49760 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.6■□□□□ 0.89
CLK2P49760 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CLK2P49760 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLK2P49760 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLK2P49760 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLK2P49760 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLK2P49760 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms