Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ARCN1P48444 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.28■□□□□ 0.52
ARCN1P48444 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 AC093010.1-201ENST00000473625 1624 ntBASIC18.28■□□□□ 0.52
ARCN1P48444 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.28■□□□□ 0.52
ARCN1P48444 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.28■□□□□ 0.52
ARCN1P48444 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ARCN1P48444 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.28■□□□□ 0.52
ARCN1P48444 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.28■□□□□ 0.52
ARCN1P48444 AC009065.1-201ENST00000564055 1225 ntBASIC18.28■□□□□ 0.52
ARCN1P48444 NEK4P2-201ENST00000580004 1012 ntBASIC18.28■□□□□ 0.52
ARCN1P48444 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.28■□□□□ 0.52
ARCN1P48444 AC024243.1-201ENST00000609234 778 ntBASIC18.28■□□□□ 0.52
ARCN1P48444 AC006011.2-201ENST00000621313 1158 ntBASIC18.28■□□□□ 0.52
ARCN1P48444 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.28■□□□□ 0.52
ARCN1P48444 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.28■□□□□ 0.52
ARCN1P48444 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ARCN1P48444 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ARCN1P48444 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 AP000997.3-201ENST00000623333 2250 ntBASIC18.28■□□□□ 0.52
ARCN1P48444 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.28■□□□□ 0.52
ARCN1P48444 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARCN1P48444 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ARCN1P48444 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ARCN1P48444 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.27■□□□□ 0.52
ARCN1P48444 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ARCN1P48444 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.27■□□□□ 0.52
ARCN1P48444 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.27■□□□□ 0.52
ARCN1P48444 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 AL049597.2-201ENST00000565575 961 ntBASIC18.27■□□□□ 0.52
ARCN1P48444 AL512604.3-201ENST00000569583 964 ntBASIC18.27■□□□□ 0.52
ARCN1P48444 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
ARCN1P48444 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ARCN1P48444 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.27■□□□□ 0.52
ARCN1P48444 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARCN1P48444 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.27■□□□□ 0.52
ARCN1P48444 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
ARCN1P48444 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ARCN1P48444 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARCN1P48444 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARCN1P48444 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ARCN1P48444 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARCN1P48444 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.27■□□□□ 0.51
ARCN1P48444 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
ARCN1P48444 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.26■□□□□ 0.51
ARCN1P48444 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
ARCN1P48444 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.26■□□□□ 0.51
ARCN1P48444 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.26■□□□□ 0.51
ARCN1P48444 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
ARCN1P48444 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
ARCN1P48444 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
ARCN1P48444 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.26■□□□□ 0.51
ARCN1P48444 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ARCN1P48444 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.26■□□□□ 0.51
ARCN1P48444 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ARCN1P48444 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.26■□□□□ 0.51
ARCN1P48444 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
ARCN1P48444 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
ARCN1P48444 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ARCN1P48444 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ARCN1P48444 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARCN1P48444 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.26■□□□□ 0.51
ARCN1P48444 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms