Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.72■□□□□ 0.91
TM4SF4P48230 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.72■□□□□ 0.91
TM4SF4P48230 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.72■□□□□ 0.91
TM4SF4P48230 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TM4SF4P48230 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
TM4SF4P48230 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.72■□□□□ 0.91
TM4SF4P48230 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TM4SF4P48230 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.72■□□□□ 0.91
TM4SF4P48230 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
TM4SF4P48230 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.71■□□□□ 0.91
TM4SF4P48230 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.71■□□□□ 0.91
TM4SF4P48230 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.71■□□□□ 0.91
TM4SF4P48230 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.71■□□□□ 0.91
TM4SF4P48230 PNKD-204ENST00000436005 978 ntTSL 5 BASIC20.71■□□□□ 0.91
TM4SF4P48230 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.71■□□□□ 0.91
TM4SF4P48230 PAWRP1-201ENST00000451083 565 ntBASIC20.71■□□□□ 0.91
TM4SF4P48230 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.71■□□□□ 0.91
TM4SF4P48230 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
TM4SF4P48230 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TM4SF4P48230 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TM4SF4P48230 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TM4SF4P48230 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
TM4SF4P48230 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.7■□□□□ 0.9
TM4SF4P48230 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.7■□□□□ 0.9
TM4SF4P48230 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TM4SF4P48230 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 SPDYE21P-201ENST00000413323 827 ntBASIC20.7■□□□□ 0.9
TM4SF4P48230 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.7■□□□□ 0.9
TM4SF4P48230 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.7■□□□□ 0.9
TM4SF4P48230 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 AC108073.2-201ENST00000464002 357 ntBASIC20.7■□□□□ 0.9
TM4SF4P48230 AP000344.2-201ENST00000512987 629 ntBASIC20.7■□□□□ 0.9
TM4SF4P48230 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.7■□□□□ 0.9
TM4SF4P48230 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TM4SF4P48230 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.7■□□□□ 0.9
TM4SF4P48230 AC138761.1-201ENST00000584393 385 ntBASIC20.7■□□□□ 0.9
TM4SF4P48230 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.7■□□□□ 0.9
TM4SF4P48230 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 AC099343.3-201ENST00000605834 2503 ntBASIC20.7■□□□□ 0.9
TM4SF4P48230 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM4SF4P48230 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.69■□□□□ 0.9
TM4SF4P48230 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TM4SF4P48230 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.69■□□□□ 0.9
TM4SF4P48230 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TM4SF4P48230 MYLKP1-201ENST00000509077 1580 ntBASIC20.69■□□□□ 0.9
TM4SF4P48230 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.69■□□□□ 0.9
TM4SF4P48230 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.69■□□□□ 0.9
TM4SF4P48230 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
TM4SF4P48230 AC092474.2-201ENST00000424288 719 ntBASIC20.69■□□□□ 0.9
TM4SF4P48230 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.69■□□□□ 0.9
TM4SF4P48230 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TM4SF4P48230 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.69■□□□□ 0.9
TM4SF4P48230 MIR4751-201ENST00000578027 74 ntBASIC20.69■□□□□ 0.9
TM4SF4P48230 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TM4SF4P48230 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TM4SF4P48230 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM4SF4P48230 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
TM4SF4P48230 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.68■□□□□ 0.9
TM4SF4P48230 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.68■□□□□ 0.9
TM4SF4P48230 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TM4SF4P48230 AC006504.4-201ENST00000592118 1568 ntBASIC20.68■□□□□ 0.9
TM4SF4P48230 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 LINC01126-201ENST00000623515 1646 ntBASIC20.68■□□□□ 0.9
TM4SF4P48230 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM4SF4P48230 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.68■□□□□ 0.9
TM4SF4P48230 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms