Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 SIRPAP1-201ENST00000448467 1770 ntBASIC16.86■□□□□ 0.29
HTR3AP46098 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HTR3AP46098 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTR3AP46098 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTR3AP46098 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTR3AP46098 HOXB1-202ENST00000577092 1414 ntBASIC16.86■□□□□ 0.29
HTR3AP46098 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR3AP46098 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.86■□□□□ 0.29
HTR3AP46098 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
HTR3AP46098 MYLKP1-201ENST00000509077 1580 ntBASIC16.85■□□□□ 0.29
HTR3AP46098 AC084018.2-201ENST00000613093 2607 ntBASIC16.85■□□□□ 0.29
HTR3AP46098 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HTR3AP46098 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.85■□□□□ 0.29
HTR3AP46098 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HTR3AP46098 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HTR3AP46098 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR3AP46098 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR3AP46098 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
HTR3AP46098 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HTR3AP46098 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.84■□□□□ 0.29
HTR3AP46098 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
HTR3AP46098 AC009065.1-201ENST00000564055 1225 ntBASIC16.84■□□□□ 0.29
HTR3AP46098 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HTR3AP46098 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.84■□□□□ 0.29
HTR3AP46098 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
HTR3AP46098 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HTR3AP46098 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HTR3AP46098 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HTR3AP46098 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HTR3AP46098 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.83■□□□□ 0.29
HTR3AP46098 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
HTR3AP46098 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
HTR3AP46098 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.83■□□□□ 0.28
HTR3AP46098 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 AC087499.1-201ENST00000418141 1075 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms