Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFC5P40937 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 LINC00602-201ENST00000629776 2065 ntBASIC20.09■□□□□ 0.81
RFC5P40937 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 VENTXP7-201ENST00000475503 772 ntBASIC20.09■□□□□ 0.81
RFC5P40937 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.09■□□□□ 0.81
RFC5P40937 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFC5P40937 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RFC5P40937 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFC5P40937 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFC5P40937 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.08■□□□□ 0.81
RFC5P40937 AC233702.3-201ENST00000578656 1387 ntBASIC20.08■□□□□ 0.81
RFC5P40937 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
RFC5P40937 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RFC5P40937 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC5P40937 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC5P40937 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RFC5P40937 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.08■□□□□ 0.81
RFC5P40937 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC5P40937 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.08■□□□□ 0.81
RFC5P40937 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.08■□□□□ 0.81
RFC5P40937 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC5P40937 AC246785.2-201ENST00000432512 513 ntBASIC20.08■□□□□ 0.81
RFC5P40937 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RFC5P40937 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.08■□□□□ 0.81
RFC5P40937 AP000867.3-201ENST00000524675 377 ntBASIC20.08■□□□□ 0.81
RFC5P40937 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.08■□□□□ 0.81
RFC5P40937 AC012615.1-201ENST00000565797 1299 ntBASIC20.08■□□□□ 0.81
RFC5P40937 Z69720.1-201ENST00000601483 472 ntBASIC20.08■□□□□ 0.81
RFC5P40937 AL353801.3-201ENST00000609898 542 ntBASIC20.08■□□□□ 0.81
RFC5P40937 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFC5P40937 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RFC5P40937 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.08■□□□□ 0.8
RFC5P40937 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFC5P40937 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFC5P40937 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
RFC5P40937 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFC5P40937 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.08■□□□□ 0.8
RFC5P40937 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.07■□□□□ 0.8
RFC5P40937 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RFC5P40937 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 KRT18P65-201ENST00000439811 1286 ntBASIC20.07■□□□□ 0.8
RFC5P40937 DUSP5P1-201ENST00000441325 1139 ntBASIC20.07■□□□□ 0.8
RFC5P40937 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.07■□□□□ 0.8
RFC5P40937 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.07■□□□□ 0.8
RFC5P40937 AC011840.4-201ENST00000578471 627 ntBASIC20.07■□□□□ 0.8
RFC5P40937 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.07■□□□□ 0.8
RFC5P40937 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
RFC5P40937 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC5P40937 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RFC5P40937 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC5P40937 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RFC5P40937 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RFC5P40937 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RFC5P40937 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC5P40937 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RFC5P40937 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms