Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20■□□□□ 0.79
KRT9P35527 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT9P35527 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT9P35527 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
KRT9P35527 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT9P35527 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
KRT9P35527 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT9P35527 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT9P35527 AP000593.1-201ENST00000393668 712 ntBASIC19.99■□□□□ 0.79
KRT9P35527 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.99■□□□□ 0.79
KRT9P35527 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 AP005242.2-201ENST00000580065 1175 ntBASIC19.99■□□□□ 0.79
KRT9P35527 MIR4497-201ENST00000583208 89 ntBASIC19.99■□□□□ 0.79
KRT9P35527 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT9P35527 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT9P35527 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
KRT9P35527 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KRT9P35527 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 GMCL1P1-201ENST00000463439 1581 ntBASIC19.99■□□□□ 0.79
KRT9P35527 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT9P35527 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT9P35527 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
KRT9P35527 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
KRT9P35527 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
KRT9P35527 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
KRT9P35527 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.98■□□□□ 0.79
KRT9P35527 CA15P1-201ENST00000481698 905 ntBASIC19.98■□□□□ 0.79
KRT9P35527 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT9P35527 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
KRT9P35527 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT9P35527 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
KRT9P35527 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KRT9P35527 PHGDH-209ENST00000641074 1780 ntBASIC19.98■□□□□ 0.79
KRT9P35527 AC099343.3-201ENST00000605834 2503 ntBASIC19.98■□□□□ 0.79
KRT9P35527 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT9P35527 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
KRT9P35527 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KRT9P35527 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KRT9P35527 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT9P35527 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 AL023284.2-201ENST00000405850 579 ntBASIC19.97■□□□□ 0.79
KRT9P35527 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT9P35527 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT9P35527 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
KRT9P35527 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT9P35527 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT9P35527 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
KRT9P35527 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
KRT9P35527 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KRT9P35527 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT9P35527 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT9P35527 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
KRT9P35527 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 KRT8P50-201ENST00000562022 1438 ntBASIC19.96■□□□□ 0.79
KRT9P35527 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT9P35527 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.96■□□□□ 0.79
KRT9P35527 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT9P35527 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.96■□□□□ 0.79
KRT9P35527 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms