Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.87■■□□□ 1.25
RFC4P35249 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.87■■□□□ 1.25
RFC4P35249 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 AC002347.1-201ENST00000569543 541 ntBASIC22.87■■□□□ 1.25
RFC4P35249 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RFC4P35249 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.87■■□□□ 1.25
RFC4P35249 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
RFC4P35249 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFC4P35249 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.87■■□□□ 1.25
RFC4P35249 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RFC4P35249 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.86■■□□□ 1.25
RFC4P35249 AC022898.2-201ENST00000616822 1312 ntBASIC22.86■■□□□ 1.25
RFC4P35249 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RFC4P35249 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.86■■□□□ 1.25
RFC4P35249 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 KRT18P65-201ENST00000439811 1286 ntBASIC22.86■■□□□ 1.25
RFC4P35249 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.86■■□□□ 1.25
RFC4P35249 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.86■■□□□ 1.25
RFC4P35249 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.86■■□□□ 1.25
RFC4P35249 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFC4P35249 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RFC4P35249 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.86■■□□□ 1.25
RFC4P35249 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.85■■□□□ 1.25
RFC4P35249 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.85■■□□□ 1.25
RFC4P35249 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.85■■□□□ 1.25
RFC4P35249 AC023274.1-201ENST00000418278 595 ntBASIC22.85■■□□□ 1.25
RFC4P35249 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.85■■□□□ 1.25
RFC4P35249 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.85■■□□□ 1.25
RFC4P35249 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.85■■□□□ 1.25
RFC4P35249 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.85■■□□□ 1.25
RFC4P35249 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.85■■□□□ 1.25
RFC4P35249 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RFC4P35249 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
RFC4P35249 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RFC4P35249 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RFC4P35249 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFC4P35249 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
RFC4P35249 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC22.84■■□□□ 1.25
RFC4P35249 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
RFC4P35249 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.84■■□□□ 1.25
RFC4P35249 LAGE3P1-201ENST00000425356 484 ntBASIC22.84■■□□□ 1.25
RFC4P35249 CRCP-205ENST00000431089 942 ntTSL 2 BASIC22.84■■□□□ 1.25
RFC4P35249 AC009947.1-201ENST00000444350 727 ntBASIC22.84■■□□□ 1.25
RFC4P35249 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.84■■□□□ 1.25
RFC4P35249 DNAJB3-202ENST00000449667 1266 ntBASIC22.84■■□□□ 1.25
RFC4P35249 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.84■■□□□ 1.25
RFC4P35249 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
RFC4P35249 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.84■■□□□ 1.25
RFC4P35249 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFC4P35249 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.84■■□□□ 1.25
RFC4P35249 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC22.84■■□□□ 1.25
RFC4P35249 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.84■■□□□ 1.25
RFC4P35249 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC22.83■■□□□ 1.25
RFC4P35249 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC22.83■■□□□ 1.25
RFC4P35249 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.83■■□□□ 1.25
RFC4P35249 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.83■■□□□ 1.25
RFC4P35249 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms