Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNGA1P29973 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.74■□□□□ 0.91
CNGA1P29973 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CNGA1P29973 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNGA1P29973 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.73■□□□□ 0.91
CNGA1P29973 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CNGA1P29973 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.73■□□□□ 0.91
CNGA1P29973 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CNGA1P29973 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 AC132008.2-207ENST00000454517 770 ntBASIC20.73■□□□□ 0.91
CNGA1P29973 RNPS1P1-201ENST00000507437 918 ntBASIC20.73■□□□□ 0.91
CNGA1P29973 AC106730.1-201ENST00000566722 1090 ntBASIC20.73■□□□□ 0.91
CNGA1P29973 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.73■□□□□ 0.91
CNGA1P29973 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CNGA1P29973 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.73■□□□□ 0.91
CNGA1P29973 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 KRT89P-201ENST00000620027 1478 ntBASIC20.73■□□□□ 0.91
CNGA1P29973 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.73■□□□□ 0.91
CNGA1P29973 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CNGA1P29973 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CNGA1P29973 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CNGA1P29973 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNGA1P29973 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CNGA1P29973 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.72■□□□□ 0.91
CNGA1P29973 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CNGA1P29973 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CNGA1P29973 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.72■□□□□ 0.91
CNGA1P29973 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.72■□□□□ 0.91
CNGA1P29973 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CNGA1P29973 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.72■□□□□ 0.91
CNGA1P29973 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.72■□□□□ 0.91
CNGA1P29973 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CNGA1P29973 AC243591.1-201ENST00000452967 1364 ntBASIC20.72■□□□□ 0.91
CNGA1P29973 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNGA1P29973 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.71■□□□□ 0.91
CNGA1P29973 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CNGA1P29973 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
CNGA1P29973 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.71■□□□□ 0.91
CNGA1P29973 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.71■□□□□ 0.91
CNGA1P29973 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 PMS2P7-201ENST00000506558 1336 ntBASIC20.71■□□□□ 0.91
CNGA1P29973 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.71■□□□□ 0.91
CNGA1P29973 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.71■□□□□ 0.91
CNGA1P29973 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CNGA1P29973 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.71■□□□□ 0.91
CNGA1P29973 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CNGA1P29973 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CNGA1P29973 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CNGA1P29973 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.7■□□□□ 0.9
CNGA1P29973 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CNGA1P29973 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
CNGA1P29973 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 RPL13AP23-201ENST00000480739 586 ntBASIC20.7■□□□□ 0.9
CNGA1P29973 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNGA1P29973 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms