Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.08■□□□□ 0.32
CHMP24386 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP24386 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.08■□□□□ 0.32
CHMP24386 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP24386 AC010331.1-201ENST00000611423 582 ntBASIC17.08■□□□□ 0.32
CHMP24386 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHMP24386 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP24386 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP24386 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP24386 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CHMP24386 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.07■□□□□ 0.32
CHMP24386 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.07■□□□□ 0.32
CHMP24386 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CHMP24386 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.07■□□□□ 0.32
CHMP24386 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP24386 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP24386 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP24386 AC010203.1-204ENST00000548782 407 ntBASIC17.07■□□□□ 0.32
CHMP24386 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
CHMP24386 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CHMP24386 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP24386 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP24386 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHMP24386 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP24386 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CHMP24386 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.06■□□□□ 0.32
CHMP24386 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP24386 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP24386 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP24386 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CHMP24386 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.06■□□□□ 0.32
CHMP24386 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CHMP24386 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CHMP24386 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CHMP24386 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 AC134043.2-201ENST00000624206 2238 ntBASIC17.05■□□□□ 0.32
CHMP24386 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CHMP24386 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CHMP24386 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP24386 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 AL049597.2-201ENST00000565575 961 ntBASIC17.05■□□□□ 0.32
CHMP24386 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.05■□□□□ 0.32
CHMP24386 AL590326.2-201ENST00000625139 305 ntBASIC17.05■□□□□ 0.32
CHMP24386 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.05■□□□□ 0.32
CHMP24386 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHMP24386 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHMP24386 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CHMP24386 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.04■□□□□ 0.32
CHMP24386 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms