Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.4■□□□□ 0.54
XPAP23025 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.4■□□□□ 0.54
XPAP23025 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.4■□□□□ 0.54
XPAP23025 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
XPAP23025 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.4■□□□□ 0.54
XPAP23025 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.4■□□□□ 0.54
XPAP23025 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.4■□□□□ 0.54
XPAP23025 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.4■□□□□ 0.54
XPAP23025 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.4■□□□□ 0.54
XPAP23025 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.4■□□□□ 0.54
XPAP23025 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
XPAP23025 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
XPAP23025 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
XPAP23025 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.4■□□□□ 0.54
XPAP23025 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
XPAP23025 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
XPAP23025 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
XPAP23025 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.39■□□□□ 0.53
XPAP23025 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.39■□□□□ 0.53
XPAP23025 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.39■□□□□ 0.53
XPAP23025 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 TSPY22P-201ENST00000427496 604 ntBASIC18.39■□□□□ 0.53
XPAP23025 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.39■□□□□ 0.53
XPAP23025 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
XPAP23025 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.39■□□□□ 0.53
XPAP23025 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
XPAP23025 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.39■□□□□ 0.53
XPAP23025 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.39■□□□□ 0.53
XPAP23025 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
XPAP23025 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
XPAP23025 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
XPAP23025 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.38■□□□□ 0.53
XPAP23025 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.38■□□□□ 0.53
XPAP23025 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 AC087289.5-201ENST00000586076 3175 ntBASIC18.38■□□□□ 0.53
XPAP23025 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.38■□□□□ 0.53
XPAP23025 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.38■□□□□ 0.53
XPAP23025 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.38■□□□□ 0.53
XPAP23025 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.38■□□□□ 0.53
XPAP23025 AC005332.3-201ENST00000589904 676 ntBASIC18.38■□□□□ 0.53
XPAP23025 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.38■□□□□ 0.53
XPAP23025 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
XPAP23025 CROCCP3-202ENST00000420820 1947 ntBASIC18.38■□□□□ 0.53
XPAP23025 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
XPAP23025 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
XPAP23025 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.38■□□□□ 0.53
XPAP23025 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.38■□□□□ 0.53
XPAP23025 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
XPAP23025 Z83836.1-201ENST00000624605 1642 ntBASIC18.38■□□□□ 0.53
XPAP23025 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
XPAP23025 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.37■□□□□ 0.53
XPAP23025 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.37■□□□□ 0.53
XPAP23025 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
XPAP23025 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
XPAP23025 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.37■□□□□ 0.53
XPAP23025 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
XPAP23025 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms