Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 AC006128.1-201ENST00000624704 1661 ntBASIC17.84■□□□□ 0.45
SDHBP21912 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHBP21912 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHBP21912 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SDHBP21912 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHBP21912 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHBP21912 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
SDHBP21912 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHBP21912 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHBP21912 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.84■□□□□ 0.45
SDHBP21912 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
SDHBP21912 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SDHBP21912 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHBP21912 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SDHBP21912 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SDHBP21912 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHBP21912 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.83■□□□□ 0.45
SDHBP21912 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.83■□□□□ 0.45
SDHBP21912 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHBP21912 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.83■□□□□ 0.44
SDHBP21912 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.83■□□□□ 0.44
SDHBP21912 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.83■□□□□ 0.44
SDHBP21912 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.83■□□□□ 0.44
SDHBP21912 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.83■□□□□ 0.44
SDHBP21912 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.83■□□□□ 0.44
SDHBP21912 AL139288.1-201ENST00000623748 933 ntBASIC17.83■□□□□ 0.44
SDHBP21912 PGM5P2-202ENST00000637225 1043 ntBASIC17.83■□□□□ 0.44
SDHBP21912 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.83■□□□□ 0.44
SDHBP21912 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.83■□□□□ 0.44
SDHBP21912 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.83■□□□□ 0.44
SDHBP21912 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SDHBP21912 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.83■□□□□ 0.44
SDHBP21912 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.83■□□□□ 0.44
SDHBP21912 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHBP21912 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.82■□□□□ 0.44
SDHBP21912 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
SDHBP21912 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.82■□□□□ 0.44
SDHBP21912 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.82■□□□□ 0.44
SDHBP21912 AC112777.1-201ENST00000540175 1423 ntBASIC17.82■□□□□ 0.44
SDHBP21912 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.82■□□□□ 0.44
SDHBP21912 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
SDHBP21912 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHBP21912 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.82■□□□□ 0.44
SDHBP21912 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.82■□□□□ 0.44
SDHBP21912 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.82■□□□□ 0.44
SDHBP21912 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.82■□□□□ 0.44
SDHBP21912 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.82■□□□□ 0.44
SDHBP21912 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SDHBP21912 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.82■□□□□ 0.44
SDHBP21912 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms