Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.17■□□□□ 0.66
PDGFRAP16234 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 AC034232.1-201ENST00000506026 1064 ntBASIC19.17■□□□□ 0.66
PDGFRAP16234 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFRAP16234 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.17■□□□□ 0.66
PDGFRAP16234 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFRAP16234 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 LINC01126-201ENST00000623515 1646 ntBASIC19.17■□□□□ 0.66
PDGFRAP16234 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFRAP16234 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDGFRAP16234 PHGDH-209ENST00000641074 1780 ntBASIC19.16■□□□□ 0.66
PDGFRAP16234 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFRAP16234 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFRAP16234 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFRAP16234 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDGFRAP16234 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFRAP16234 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFRAP16234 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDGFRAP16234 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFRAP16234 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFRAP16234 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFRAP16234 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PDGFRAP16234 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.16■□□□□ 0.66
PDGFRAP16234 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFRAP16234 AL359075.1-203ENST00000462729 1002 ntBASIC19.16■□□□□ 0.66
PDGFRAP16234 LINC01238-205ENST00000567549 1107 ntBASIC19.16■□□□□ 0.66
PDGFRAP16234 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFRAP16234 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PDGFRAP16234 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.16■□□□□ 0.66
PDGFRAP16234 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
PDGFRAP16234 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.16■□□□□ 0.66
PDGFRAP16234 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PDGFRAP16234 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
PDGFRAP16234 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFRAP16234 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDGFRAP16234 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PDGFRAP16234 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PDGFRAP16234 FAM8A6P-201ENST00000407496 1135 ntBASIC19.15■□□□□ 0.66
PDGFRAP16234 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFRAP16234 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFRAP16234 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDGFRAP16234 AC087388.1-201ENST00000571370 1112 ntBASIC19.15■□□□□ 0.66
PDGFRAP16234 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFRAP16234 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PDGFRAP16234 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.15■□□□□ 0.66
PDGFRAP16234 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFRAP16234 AL024508.2-201ENST00000607749 1894 ntBASIC19.15■□□□□ 0.66
PDGFRAP16234 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.15■□□□□ 0.66
PDGFRAP16234 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
PDGFRAP16234 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFRAP16234 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFRAP16234 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFRAP16234 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFRAP16234 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
PDGFRAP16234 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.14■□□□□ 0.66
PDGFRAP16234 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.14■□□□□ 0.66
PDGFRAP16234 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDGFRAP16234 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDGFRAP16234 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDGFRAP16234 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFRAP16234 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.14■□□□□ 0.65
PDGFRAP16234 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFRAP16234 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.14■□□□□ 0.65
PDGFRAP16234 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.14■□□□□ 0.65
PDGFRAP16234 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFRAP16234 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.14■□□□□ 0.65
PDGFRAP16234 RASA4DP-201ENST00000460726 1199 ntBASIC19.14■□□□□ 0.65
PDGFRAP16234 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFRAP16234 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.14■□□□□ 0.65
PDGFRAP16234 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFRAP16234 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.14■□□□□ 0.65
PDGFRAP16234 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.14■□□□□ 0.65
PDGFRAP16234 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
PDGFRAP16234 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
PDGFRAP16234 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFRAP16234 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDGFRAP16234 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms