Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
TOP2AP11388 PCDHAC2-203ENST00000615316 3011 ntBASIC31.8■■■□□ 2.68
TOP2AP11388 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC31.8■■■□□ 2.68
TOP2AP11388 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TOP2AP11388 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC31.8■■■□□ 2.68
TOP2AP11388 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC31.8■■■□□ 2.68
TOP2AP11388 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TOP2AP11388 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
TOP2AP11388 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC31.79■■■□□ 2.68
TOP2AP11388 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC31.79■■■□□ 2.68
TOP2AP11388 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
TOP2AP11388 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC31.79■■■□□ 2.68
TOP2AP11388 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC31.79■■■□□ 2.68
TOP2AP11388 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC31.79■■■□□ 2.68
TOP2AP11388 AC096633.1-201ENST00000422446 749 ntBASIC31.79■■■□□ 2.68
TOP2AP11388 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC31.79■■■□□ 2.68
TOP2AP11388 AD001527.2-201ENST00000622994 785 ntBASIC31.79■■■□□ 2.68
TOP2AP11388 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
TOP2AP11388 AFG3L1P-217ENST00000557444 2447 ntBASIC31.79■■■□□ 2.68
TOP2AP11388 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC31.79■■■□□ 2.68
TOP2AP11388 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC31.79■■■□□ 2.68
TOP2AP11388 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
TOP2AP11388 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC31.78■■■□□ 2.68
TOP2AP11388 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC31.78■■■□□ 2.68
TOP2AP11388 ADM-207ENST00000530439 1839 ntTSL 2 BASIC31.78■■■□□ 2.68
TOP2AP11388 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
TOP2AP11388 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
TOP2AP11388 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC31.78■■■□□ 2.68
TOP2AP11388 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
TOP2AP11388 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
TOP2AP11388 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC31.78■■■□□ 2.68
TOP2AP11388 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
TOP2AP11388 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TOP2AP11388 ANO7L1-203ENST00000602586 1720 ntBASIC31.78■■■□□ 2.68
TOP2AP11388 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC31.78■■■□□ 2.68
TOP2AP11388 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC31.77■■■□□ 2.68
TOP2AP11388 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
TOP2AP11388 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
TOP2AP11388 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC31.77■■■□□ 2.68
TOP2AP11388 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC31.77■■■□□ 2.68
TOP2AP11388 DNAJB3-201ENST00000446806 729 ntBASIC31.77■■■□□ 2.68
TOP2AP11388 BX005266.1-201ENST00000473402 457 ntBASIC31.77■■■□□ 2.68
TOP2AP11388 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 RNA5SP416-201ENST00000516838 111 ntBASIC31.77■■■□□ 2.68
TOP2AP11388 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC31.77■■■□□ 2.68
TOP2AP11388 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC31.77■■■□□ 2.68
TOP2AP11388 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC31.77■■■□□ 2.68
TOP2AP11388 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC31.77■■■□□ 2.68
TOP2AP11388 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC31.77■■■□□ 2.68
TOP2AP11388 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC31.77■■■□□ 2.68
TOP2AP11388 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
TOP2AP11388 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
TOP2AP11388 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
TOP2AP11388 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
TOP2AP11388 INIP-202ENST00000374236 874 ntTSL 2 BASIC31.76■■■□□ 2.68
TOP2AP11388 SRP19-202ENST00000445150 833 ntTSL 2 BASIC31.76■■■□□ 2.68
TOP2AP11388 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.68
TOP2AP11388 AC002347.1-201ENST00000569543 541 ntBASIC31.76■■■□□ 2.68
TOP2AP11388 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.68
TOP2AP11388 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
TOP2AP11388 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TOP2AP11388 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TOP2AP11388 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TOP2AP11388 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
TOP2AP11388 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TOP2AP11388 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
TOP2AP11388 PMP22-202ENST00000395936 816 ntTSL 3 BASIC31.75■■■□□ 2.67
TOP2AP11388 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
TOP2AP11388 DHDH-204ENST00000523250 634 ntTSL 5 BASIC31.75■■■□□ 2.67
TOP2AP11388 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC31.75■■■□□ 2.67
TOP2AP11388 COPE-211ENST00000600932 1144 ntTSL 5 BASIC31.75■■■□□ 2.67
TOP2AP11388 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC31.75■■■□□ 2.67
TOP2AP11388 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC31.75■■■□□ 2.67
TOP2AP11388 AC005332.7-201ENST00000614046 2005 ntBASIC31.75■■■□□ 2.67
TOP2AP11388 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC31.75■■■□□ 2.67
TOP2AP11388 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TOP2AP11388 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC31.75■■■□□ 2.67
TOP2AP11388 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC31.75■■■□□ 2.67
TOP2AP11388 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC31.75■■■□□ 2.67
TOP2AP11388 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
TOP2AP11388 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TOP2AP11388 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC31.75■■■□□ 2.67
TOP2AP11388 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TOP2AP11388 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms