Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PARP1P09874 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.16■□□□□ 0.98
PARP1P09874 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.16■□□□□ 0.98
PARP1P09874 AP002383.4-201ENST00000442518 975 ntBASIC21.16■□□□□ 0.98
PARP1P09874 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.16■□□□□ 0.98
PARP1P09874 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.16■□□□□ 0.98
PARP1P09874 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.16■□□□□ 0.98
PARP1P09874 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
PARP1P09874 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.16■□□□□ 0.98
PARP1P09874 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PARP1P09874 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PARP1P09874 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 NEFHP1-201ENST00000412845 2629 ntBASIC21.15■□□□□ 0.98
PARP1P09874 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 HCG4P8-203ENST00000443049 980 ntBASIC21.15■□□□□ 0.98
PARP1P09874 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.15■□□□□ 0.98
PARP1P09874 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
PARP1P09874 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
PARP1P09874 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.15■□□□□ 0.98
PARP1P09874 AC090616.6-201ENST00000582640 721 ntBASIC21.15■□□□□ 0.98
PARP1P09874 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PARP1P09874 AC092119.3-201ENST00000612618 583 ntBASIC21.15■□□□□ 0.98
PARP1P09874 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.15■□□□□ 0.98
PARP1P09874 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.15■□□□□ 0.98
PARP1P09874 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PARP1P09874 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.15■□□□□ 0.98
PARP1P09874 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PARP1P09874 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PARP1P09874 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PARP1P09874 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PARP1P09874 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PARP1P09874 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PARP1P09874 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PARP1P09874 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
PARP1P09874 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PARP1P09874 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PARP1P09874 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PARP1P09874 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PARP1P09874 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.14■□□□□ 0.97
PARP1P09874 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.14■□□□□ 0.97
PARP1P09874 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PARP1P09874 AP002414.4-201ENST00000589764 1148 ntBASIC21.14■□□□□ 0.97
PARP1P09874 IGHV3-41-201ENST00000613121 348 ntBASIC21.14■□□□□ 0.97
PARP1P09874 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PARP1P09874 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.14■□□□□ 0.97
PARP1P09874 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.14■□□□□ 0.97
PARP1P09874 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
PARP1P09874 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
PARP1P09874 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PARP1P09874 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.14■□□□□ 0.97
PARP1P09874 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PARP1P09874 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PARP1P09874 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.13■□□□□ 0.97
PARP1P09874 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PARP1P09874 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 KRT18P1-202ENST00000452408 1331 ntBASIC21.13■□□□□ 0.97
PARP1P09874 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PARP1P09874 MIR3180-1-201ENST00000580374 94 ntBASIC21.13■□□□□ 0.97
PARP1P09874 MIR3180-3-201ENST00000584616 94 ntBASIC21.13■□□□□ 0.97
PARP1P09874 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.13■□□□□ 0.97
PARP1P09874 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.13■□□□□ 0.97
PARP1P09874 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.13■□□□□ 0.97
PARP1P09874 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.13■□□□□ 0.97
PARP1P09874 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PARP1P09874 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PARP1P09874 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.13■□□□□ 0.97
PARP1P09874 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PARP1P09874 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PARP1P09874 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms