Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RETP07949 HOXB1-202ENST00000577092 1414 ntBASIC18.39■□□□□ 0.53
RETP07949 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.39■□□□□ 0.53
RETP07949 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RETP07949 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.38■□□□□ 0.53
RETP07949 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
RETP07949 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.38■□□□□ 0.53
RETP07949 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
RETP07949 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.38■□□□□ 0.53
RETP07949 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.38■□□□□ 0.53
RETP07949 AC073648.2-201ENST00000510116 352 ntBASIC18.38■□□□□ 0.53
RETP07949 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.38■□□□□ 0.53
RETP07949 AC011840.4-201ENST00000578471 627 ntBASIC18.38■□□□□ 0.53
RETP07949 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.38■□□□□ 0.53
RETP07949 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.38■□□□□ 0.53
RETP07949 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.38■□□□□ 0.53
RETP07949 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
RETP07949 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RETP07949 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.38■□□□□ 0.53
RETP07949 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RETP07949 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RETP07949 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.38■□□□□ 0.53
RETP07949 ZNF815P-204ENST00000434898 1737 ntBASIC18.37■□□□□ 0.53
RETP07949 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.37■□□□□ 0.53
RETP07949 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RETP07949 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.37■□□□□ 0.53
RETP07949 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.37■□□□□ 0.53
RETP07949 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.37■□□□□ 0.53
RETP07949 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RETP07949 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
RETP07949 MIR564-202ENST00000385049 94 ntBASIC18.37■□□□□ 0.53
RETP07949 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.37■□□□□ 0.53
RETP07949 PMS2P2-201ENST00000425039 1128 ntBASIC18.37■□□□□ 0.53
RETP07949 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
RETP07949 AC018712.1-201ENST00000455767 687 ntBASIC18.37■□□□□ 0.53
RETP07949 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.37■□□□□ 0.53
RETP07949 MIR5100-201ENST00000579544 119 ntBASIC18.37■□□□□ 0.53
RETP07949 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.37■□□□□ 0.53
RETP07949 AC022898.2-201ENST00000616822 1312 ntBASIC18.37■□□□□ 0.53
RETP07949 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RETP07949 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RETP07949 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.37■□□□□ 0.53
RETP07949 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.37■□□□□ 0.53
RETP07949 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
RETP07949 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RETP07949 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RETP07949 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.36■□□□□ 0.53
RETP07949 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RETP07949 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RETP07949 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RETP07949 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RETP07949 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.36■□□□□ 0.53
RETP07949 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.36■□□□□ 0.53
RETP07949 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RETP07949 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.36■□□□□ 0.53
RETP07949 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.36■□□□□ 0.53
RETP07949 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.36■□□□□ 0.53
RETP07949 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.36■□□□□ 0.53
RETP07949 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.36■□□□□ 0.53
RETP07949 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.36■□□□□ 0.53
RETP07949 AC140113.2-201ENST00000604370 208 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms