Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.17■□□□□ 0.02
CTSDP07339 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CTSDP07339 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 MIR564-202ENST00000385049 94 ntBASIC15.17■□□□□ 0.02
CTSDP07339 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.17■□□□□ 0.02
CTSDP07339 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.17■□□□□ 0.02
CTSDP07339 AC004980.1-204ENST00000429707 299 ntBASIC15.17■□□□□ 0.02
CTSDP07339 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.17■□□□□ 0.02
CTSDP07339 AC091390.4-202ENST00000476426 537 ntBASIC15.17■□□□□ 0.02
CTSDP07339 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.17■□□□□ 0.02
CTSDP07339 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CTSDP07339 AC084018.2-201ENST00000613093 2607 ntBASIC15.17■□□□□ 0.02
CTSDP07339 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
CTSDP07339 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CTSDP07339 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CTSDP07339 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 KRT16P5-201ENST00000455284 522 ntBASIC15.16■□□□□ 0.02
CTSDP07339 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.16■□□□□ 0.02
CTSDP07339 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CTSDP07339 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CTSDP07339 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CTSDP07339 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.15■□□□□ 0.02
CTSDP07339 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.15■□□□□ 0.02
CTSDP07339 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CTSDP07339 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CTSDP07339 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms