Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DOAP06340 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HLA-DOAP06340 AC114341.1-201ENST00000618070 349 ntBASIC21.47■■□□□ 1.03
HLA-DOAP06340 REXO1L6P-202ENST00000619970 1078 ntBASIC21.47■■□□□ 1.03
HLA-DOAP06340 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DOAP06340 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DOAP06340 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HLA-DOAP06340 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DOAP06340 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DOAP06340 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 AKR1C7P-201ENST00000305623 895 ntBASIC21.46■■□□□ 1.03
HLA-DOAP06340 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
HLA-DOAP06340 MTCL1P1-201ENST00000446207 792 ntBASIC21.46■■□□□ 1.03
HLA-DOAP06340 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DOAP06340 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HLA-DOAP06340 AL591684.3-201ENST00000605187 298 ntBASIC21.46■■□□□ 1.03
HLA-DOAP06340 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DOAP06340 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.46■■□□□ 1.03
HLA-DOAP06340 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
HLA-DOAP06340 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DOAP06340 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.45■■□□□ 1.03
HLA-DOAP06340 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 KRT18P65-201ENST00000439811 1286 ntBASIC21.45■■□□□ 1.02
HLA-DOAP06340 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 AC005336.2-201ENST00000593183 939 ntBASIC21.45■■□□□ 1.02
HLA-DOAP06340 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.45■■□□□ 1.02
HLA-DOAP06340 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
HLA-DOAP06340 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 GMCL1P1-201ENST00000463439 1581 ntBASIC21.44■■□□□ 1.02
HLA-DOAP06340 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DOAP06340 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.44■■□□□ 1.02
HLA-DOAP06340 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.44■■□□□ 1.02
HLA-DOAP06340 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.44■■□□□ 1.02
HLA-DOAP06340 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.44■■□□□ 1.02
HLA-DOAP06340 AP002469.2-201ENST00000531724 424 ntBASIC21.44■■□□□ 1.02
HLA-DOAP06340 MIR5100-201ENST00000579544 119 ntBASIC21.44■■□□□ 1.02
HLA-DOAP06340 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.44■■□□□ 1.02
HLA-DOAP06340 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.44■■□□□ 1.02
HLA-DOAP06340 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
HLA-DOAP06340 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
HLA-DOAP06340 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DOAP06340 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DOAP06340 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
HLA-DOAP06340 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
HLA-DOAP06340 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms