Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.98■□□□□ 0.15
LCATP04180 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.98■□□□□ 0.15
LCATP04180 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 KRT18P22-201ENST00000402024 1347 ntBASIC15.98■□□□□ 0.15
LCATP04180 AC009102.3-201ENST00000623118 1491 ntBASIC15.98■□□□□ 0.15
LCATP04180 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.98■□□□□ 0.15
LCATP04180 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.98■□□□□ 0.15
LCATP04180 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.98■□□□□ 0.15
LCATP04180 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
LCATP04180 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
LCATP04180 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.98■□□□□ 0.15
LCATP04180 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.98■□□□□ 0.15
LCATP04180 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.98■□□□□ 0.15
LCATP04180 AC009065.1-201ENST00000564055 1225 ntBASIC15.98■□□□□ 0.15
LCATP04180 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.98■□□□□ 0.15
LCATP04180 FAM87A-204ENST00000613235 858 ntBASIC15.98■□□□□ 0.15
LCATP04180 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.98■□□□□ 0.15
LCATP04180 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.98■□□□□ 0.15
LCATP04180 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.98■□□□□ 0.15
LCATP04180 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCATP04180 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 ESPNP-201ENST00000270691 2015 ntBASIC15.97■□□□□ 0.15
LCATP04180 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LCATP04180 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.97■□□□□ 0.15
LCATP04180 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 MIR149-201ENST00000384879 89 ntBASIC15.97■□□□□ 0.15
LCATP04180 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 AC009947.2-201ENST00000444014 672 ntBASIC15.97■□□□□ 0.15
LCATP04180 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.97■□□□□ 0.15
LCATP04180 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.97■□□□□ 0.15
LCATP04180 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LCATP04180 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.97■□□□□ 0.15
LCATP04180 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LCATP04180 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.96■□□□□ 0.15
LCATP04180 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LCATP04180 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LCATP04180 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LCATP04180 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
LCATP04180 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LCATP04180 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
LCATP04180 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LCATP04180 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
LCATP04180 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms