Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.23■□□□□ 0.99
COL2A1P02458 KRT8P47-201ENST00000604727 1398 ntBASIC21.23■□□□□ 0.99
COL2A1P02458 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL2A1P02458 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.23■□□□□ 0.99
COL2A1P02458 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
COL2A1P02458 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.23■□□□□ 0.99
COL2A1P02458 FAM220CP-201ENST00000395253 831 ntBASIC21.23■□□□□ 0.99
COL2A1P02458 AC093909.1-201ENST00000504731 1122 ntBASIC21.23■□□□□ 0.99
COL2A1P02458 AC021087.4-201ENST00000563761 564 ntBASIC21.23■□□□□ 0.99
COL2A1P02458 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL2A1P02458 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL2A1P02458 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL2A1P02458 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL2A1P02458 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.23■□□□□ 0.99
COL2A1P02458 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COL2A1P02458 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL2A1P02458 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.22■□□□□ 0.99
COL2A1P02458 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.22■□□□□ 0.99
COL2A1P02458 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 MIR574-201ENST00000385209 96 ntBASIC21.22■□□□□ 0.99
COL2A1P02458 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.22■□□□□ 0.99
COL2A1P02458 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.22■□□□□ 0.99
COL2A1P02458 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.22■□□□□ 0.99
COL2A1P02458 AC025062.2-201ENST00000605477 670 ntBASIC21.22■□□□□ 0.99
COL2A1P02458 AF228730.7-201ENST00000641842 219 ntBASIC21.22■□□□□ 0.99
COL2A1P02458 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.22■□□□□ 0.99
COL2A1P02458 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.22■□□□□ 0.99
COL2A1P02458 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
COL2A1P02458 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 CROCCP3-202ENST00000420820 1947 ntBASIC21.22■□□□□ 0.99
COL2A1P02458 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.22■□□□□ 0.99
COL2A1P02458 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL2A1P02458 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL2A1P02458 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.21■□□□□ 0.99
COL2A1P02458 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.21■□□□□ 0.99
COL2A1P02458 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
COL2A1P02458 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL2A1P02458 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
COL2A1P02458 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL2A1P02458 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL2A1P02458 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
COL2A1P02458 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL2A1P02458 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL2A1P02458 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.21■□□□□ 0.99
COL2A1P02458 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
COL2A1P02458 AL356309.3-201ENST00000624132 1934 ntBASIC21.21■□□□□ 0.99
COL2A1P02458 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.21■□□□□ 0.99
COL2A1P02458 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 AC145285.3-201ENST00000564603 959 ntBASIC21.2■□□□□ 0.98
COL2A1P02458 AC106730.1-201ENST00000566722 1090 ntBASIC21.2■□□□□ 0.98
COL2A1P02458 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.2■□□□□ 0.98
COL2A1P02458 AP000867.4-201ENST00000641616 219 ntBASIC21.2■□□□□ 0.98
COL2A1P02458 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
COL2A1P02458 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL2A1P02458 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
COL2A1P02458 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.2■□□□□ 0.98
COL2A1P02458 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 AC122714.2-201ENST00000502787 707 ntBASIC21.2■□□□□ 0.98
COL2A1P02458 IGHV3-22-201ENST00000520721 359 ntBASIC21.2■□□□□ 0.98
COL2A1P02458 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL2A1P02458 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.2■□□□□ 0.98
COL2A1P02458 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.2■□□□□ 0.98
COL2A1P02458 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.2■□□□□ 0.98
COL2A1P02458 AC073592.4-201ENST00000623827 446 ntBASIC21.2■□□□□ 0.98
COL2A1P02458 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
COL2A1P02458 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL2A1P02458 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
COL2A1P02458 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL2A1P02458 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL2A1P02458 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL2A1P02458 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
COL2A1P02458 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL2A1P02458 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL2A1P02458 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.19■□□□□ 0.98
COL2A1P02458 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms