Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 HEIH-201ENST00000623091 1652 ntBASIC18.72■□□□□ 0.59
TOP3BO95985 ABALON-201ENST00000629058 1903 ntBASIC18.72■□□□□ 0.59
TOP3BO95985 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP3BO95985 AC073592.3-201ENST00000625118 1834 ntBASIC18.72■□□□□ 0.59
TOP3BO95985 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TOP3BO95985 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TOP3BO95985 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TOP3BO95985 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.71■□□□□ 0.59
TOP3BO95985 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.71■□□□□ 0.59
TOP3BO95985 MTMR9LP-203ENST00000426597 1545 ntBASIC18.71■□□□□ 0.59
TOP3BO95985 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.71■□□□□ 0.59
TOP3BO95985 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 TSPY17P-201ENST00000450329 467 ntBASIC18.71■□□□□ 0.59
TOP3BO95985 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.71■□□□□ 0.59
TOP3BO95985 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
TOP3BO95985 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TOP3BO95985 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.71■□□□□ 0.59
TOP3BO95985 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TOP3BO95985 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TOP3BO95985 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TOP3BO95985 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
TOP3BO95985 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TOP3BO95985 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TOP3BO95985 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.7■□□□□ 0.58
TOP3BO95985 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TOP3BO95985 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TOP3BO95985 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.7■□□□□ 0.58
TOP3BO95985 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TOP3BO95985 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.7■□□□□ 0.58
TOP3BO95985 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 Z85996.1-201ENST00000494644 937 ntBASIC18.7■□□□□ 0.58
TOP3BO95985 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.7■□□□□ 0.58
TOP3BO95985 AC111152.3-201ENST00000569699 673 ntBASIC18.7■□□□□ 0.58
TOP3BO95985 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.7■□□□□ 0.58
TOP3BO95985 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TOP3BO95985 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TOP3BO95985 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TOP3BO95985 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TOP3BO95985 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.7■□□□□ 0.58
TOP3BO95985 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.7■□□□□ 0.58
TOP3BO95985 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TOP3BO95985 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.69■□□□□ 0.58
TOP3BO95985 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TOP3BO95985 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.69■□□□□ 0.58
TOP3BO95985 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 LINC01311-201ENST00000565162 1445 ntBASIC18.69■□□□□ 0.58
TOP3BO95985 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.69■□□□□ 0.58
TOP3BO95985 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.69■□□□□ 0.58
TOP3BO95985 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.69■□□□□ 0.58
TOP3BO95985 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.69■□□□□ 0.58
TOP3BO95985 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.69■□□□□ 0.58
TOP3BO95985 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.69■□□□□ 0.58
TOP3BO95985 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TOP3BO95985 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TOP3BO95985 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TOP3BO95985 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms