Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.49■□□□□ 0.55
USP1O94782 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP1O94782 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
USP1O94782 FLJ13224-201ENST00000313737 1514 ntBASIC18.49■□□□□ 0.55
USP1O94782 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.48■□□□□ 0.55
USP1O94782 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.48■□□□□ 0.55
USP1O94782 AL096828.2-201ENST00000567259 1965 ntBASIC18.48■□□□□ 0.55
USP1O94782 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 PHGDH-209ENST00000641074 1780 ntBASIC18.48■□□□□ 0.55
USP1O94782 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
USP1O94782 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.48■□□□□ 0.55
USP1O94782 KRT18P23-201ENST00000435622 1283 ntBASIC18.48■□□□□ 0.55
USP1O94782 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 AC073912.3-201ENST00000624414 853 ntBASIC18.48■□□□□ 0.55
USP1O94782 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
USP1O94782 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP1O94782 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
USP1O94782 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
USP1O94782 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.47■□□□□ 0.55
USP1O94782 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.47■□□□□ 0.55
USP1O94782 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
USP1O94782 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
USP1O94782 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
USP1O94782 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.47■□□□□ 0.55
USP1O94782 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 BX088651.1-201ENST00000540551 451 ntBASIC18.47■□□□□ 0.55
USP1O94782 AL355075.4-201ENST00000554988 638 ntBASIC18.47■□□□□ 0.55
USP1O94782 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.47■□□□□ 0.55
USP1O94782 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
USP1O94782 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USP1O94782 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
USP1O94782 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP1O94782 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USP1O94782 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
USP1O94782 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.46■□□□□ 0.55
USP1O94782 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 AL390955.1-201ENST00000428694 934 ntBASIC18.46■□□□□ 0.55
USP1O94782 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.46■□□□□ 0.55
USP1O94782 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
USP1O94782 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.46■□□□□ 0.55
USP1O94782 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.46■□□□□ 0.55
USP1O94782 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.46■□□□□ 0.55
USP1O94782 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
USP1O94782 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 AC116562.4-202ENST00000641738 218 ntBASIC18.46■□□□□ 0.55
USP1O94782 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
USP1O94782 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
USP1O94782 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.46■□□□□ 0.55
USP1O94782 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP1O94782 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms