Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ZNF253O75346 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.25□□□□□ -0.13
ZNF253O75346 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.25□□□□□ -0.13
ZNF253O75346 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ZNF253O75346 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ZNF253O75346 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF253O75346 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF253O75346 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF253O75346 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF253O75346 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
ZNF253O75346 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ZNF253O75346 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF253O75346 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.24□□□□□ -0.13
ZNF253O75346 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.24□□□□□ -0.13
ZNF253O75346 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.24□□□□□ -0.13
ZNF253O75346 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.24□□□□□ -0.13
ZNF253O75346 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ZNF253O75346 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ZNF253O75346 KRT8P45-201ENST00000414328 1447 ntBASIC14.24□□□□□ -0.13
ZNF253O75346 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 AC134043.2-201ENST00000624206 2238 ntBASIC14.23□□□□□ -0.13
ZNF253O75346 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
ZNF253O75346 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF253O75346 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 AP003097.1-201ENST00000530657 1135 ntBASIC14.23□□□□□ -0.13
ZNF253O75346 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ZNF253O75346 AC008403.3-201ENST00000598924 454 ntBASIC14.23□□□□□ -0.13
ZNF253O75346 AC069544.1-201ENST00000609399 999 ntBASIC14.23□□□□□ -0.13
ZNF253O75346 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 AC131212.4-201ENST00000623606 975 ntBASIC14.23□□□□□ -0.13
ZNF253O75346 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
ZNF253O75346 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
ZNF253O75346 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.23□□□□□ -0.13
ZNF253O75346 KRT8P11-201ENST00000409686 1436 ntBASIC14.23□□□□□ -0.13
ZNF253O75346 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF253O75346 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF253O75346 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF253O75346 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms