Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM13O60858 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM13O60858 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM13O60858 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRIM13O60858 AC128676.1-201ENST00000454392 318 ntBASIC17.99■□□□□ 0.47
TRIM13O60858 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.99■□□□□ 0.47
TRIM13O60858 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM13O60858 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM13O60858 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.99■□□□□ 0.47
TRIM13O60858 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.99■□□□□ 0.47
TRIM13O60858 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRIM13O60858 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRIM13O60858 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRIM13O60858 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TRIM13O60858 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM13O60858 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM13O60858 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM13O60858 RPPH1-201ENST00000516869 333 ntBASIC17.98■□□□□ 0.47
TRIM13O60858 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM13O60858 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.98■□□□□ 0.47
TRIM13O60858 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM13O60858 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM13O60858 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM13O60858 AL645608.8-201ENST00000606034 2086 ntBASIC17.98■□□□□ 0.47
TRIM13O60858 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM13O60858 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRIM13O60858 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM13O60858 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM13O60858 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM13O60858 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.98■□□□□ 0.47
TRIM13O60858 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM13O60858 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM13O60858 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TRIM13O60858 MIR149-201ENST00000384879 89 ntBASIC17.97■□□□□ 0.47
TRIM13O60858 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM13O60858 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM13O60858 MIR3180-5-201ENST00000583743 153 ntBASIC17.97■□□□□ 0.47
TRIM13O60858 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRIM13O60858 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM13O60858 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM13O60858 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM13O60858 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
TRIM13O60858 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 KRT18P55-202ENST00000578578 1546 ntBASIC17.97■□□□□ 0.47
TRIM13O60858 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRIM13O60858 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM13O60858 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM13O60858 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM13O60858 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 AC036111.1-201ENST00000533973 1582 ntBASIC17.96■□□□□ 0.47
TRIM13O60858 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM13O60858 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM13O60858 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM13O60858 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRIM13O60858 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM13O60858 MFAP1P1-201ENST00000442257 1255 ntBASIC17.96■□□□□ 0.47
TRIM13O60858 CA15P1-201ENST00000481698 905 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms