Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 TOB2P1-201ENST00000469761 992 ntBASIC18.65■□□□□ 0.58
SYNCRIPO60506 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 TPSP2-201ENST00000561760 610 ntBASIC18.65■□□□□ 0.58
SYNCRIPO60506 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SYNCRIPO60506 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNCRIPO60506 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SYNCRIPO60506 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
SYNCRIPO60506 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
SYNCRIPO60506 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 AP000593.1-201ENST00000393668 712 ntBASIC18.64■□□□□ 0.57
SYNCRIPO60506 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 RN7SL510P-201ENST00000581311 263 ntBASIC18.64■□□□□ 0.57
SYNCRIPO60506 LINC01711-201ENST00000598340 967 ntBASIC18.64■□□□□ 0.57
SYNCRIPO60506 AL138781.2-201ENST00000617896 1843 ntBASIC18.64■□□□□ 0.57
SYNCRIPO60506 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 CROCCP3-202ENST00000420820 1947 ntBASIC18.64■□□□□ 0.57
SYNCRIPO60506 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.64■□□□□ 0.57
SYNCRIPO60506 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SYNCRIPO60506 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 AC004870.1-201ENST00000315132 882 ntBASIC18.63■□□□□ 0.57
SYNCRIPO60506 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 KRT8P50-201ENST00000562022 1438 ntBASIC18.63■□□□□ 0.57
SYNCRIPO60506 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SYNCRIPO60506 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
SYNCRIPO60506 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 IGHGP-201ENST00000390555 1178 ntBASIC18.62■□□□□ 0.57
SYNCRIPO60506 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 GUSBP12-201ENST00000513727 720 ntBASIC18.62■□□□□ 0.57
SYNCRIPO60506 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SYNCRIPO60506 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.62■□□□□ 0.57
SYNCRIPO60506 AC012615.1-201ENST00000565797 1299 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms