Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL13O43927 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL13O43927 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL13O43927 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCL13O43927 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL13O43927 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL13O43927 AC008687.5-201ENST00000593746 558 ntBASIC16.33■□□□□ 0.2
CXCL13O43927 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 AC093458.2-201ENST00000623150 629 ntBASIC16.33■□□□□ 0.2
CXCL13O43927 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CXCL13O43927 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL13O43927 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL13O43927 KRT89P-201ENST00000620027 1478 ntBASIC16.33■□□□□ 0.2
CXCL13O43927 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL13O43927 AC090340.1-201ENST00000620778 4980 ntBASIC16.33■□□□□ 0.2
CXCL13O43927 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCL13O43927 ESPNP-201ENST00000270691 2015 ntBASIC16.33■□□□□ 0.2
CXCL13O43927 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL13O43927 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCL13O43927 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCL13O43927 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.32■□□□□ 0.2
CXCL13O43927 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL13O43927 IGHGP-201ENST00000390555 1178 ntBASIC16.32■□□□□ 0.2
CXCL13O43927 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CXCL13O43927 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCL13O43927 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL13O43927 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.32■□□□□ 0.2
CXCL13O43927 BX276092.5-203ENST00000456199 560 ntBASIC16.32■□□□□ 0.2
CXCL13O43927 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCL13O43927 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.32■□□□□ 0.2
CXCL13O43927 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CXCL13O43927 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CXCL13O43927 GPR32P1-201ENST00000601788 811 ntBASIC16.32■□□□□ 0.2
CXCL13O43927 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
CXCL13O43927 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CXCL13O43927 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL13O43927 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL13O43927 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL13O43927 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CXCL13O43927 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL13O43927 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.31■□□□□ 0.2
CXCL13O43927 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL13O43927 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL13O43927 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.31■□□□□ 0.2
CXCL13O43927 AL390719.2-201ENST00000606993 987 ntBASIC16.31■□□□□ 0.2
CXCL13O43927 AL121672.3-201ENST00000608644 468 ntBASIC16.31■□□□□ 0.2
CXCL13O43927 AC069148.1-201ENST00000608741 768 ntBASIC16.31■□□□□ 0.2
CXCL13O43927 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CXCL13O43927 AC004263.2-201ENST00000617183 678 ntBASIC16.31■□□□□ 0.2
CXCL13O43927 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.31■□□□□ 0.2
CXCL13O43927 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.31■□□□□ 0.2
CXCL13O43927 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CXCL13O43927 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms