Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 AC005593.1-201ENST00000624894 515 ntBASIC19.67■□□□□ 0.74
CEP290O15078 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CEP290O15078 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CEP290O15078 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
CEP290O15078 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.67■□□□□ 0.74
CEP290O15078 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CEP290O15078 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CEP290O15078 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
CEP290O15078 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.66■□□□□ 0.74
CEP290O15078 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 DUX4L27-201ENST00000554796 1261 ntBASIC19.66■□□□□ 0.74
CEP290O15078 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 AP000867.4-201ENST00000641616 219 ntBASIC19.66■□□□□ 0.74
CEP290O15078 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 Z98044.1-201ENST00000632503 1764 ntBASIC19.66■□□□□ 0.74
CEP290O15078 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CEP290O15078 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.66■□□□□ 0.74
CEP290O15078 FAM58CP-201ENST00000435741 640 ntBASIC19.66■□□□□ 0.74
CEP290O15078 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.66■□□□□ 0.74
CEP290O15078 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.66■□□□□ 0.74
CEP290O15078 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.66■□□□□ 0.74
CEP290O15078 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.66■□□□□ 0.74
CEP290O15078 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
CEP290O15078 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CEP290O15078 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.65■□□□□ 0.74
CEP290O15078 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.65■□□□□ 0.74
CEP290O15078 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 AL358472.5-202ENST00000641448 1267 ntBASIC19.65■□□□□ 0.74
CEP290O15078 AL022326.1-202ENST00000641533 845 ntBASIC19.65■□□□□ 0.74
CEP290O15078 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.65■□□□□ 0.74
CEP290O15078 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.65■□□□□ 0.74
CEP290O15078 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.65■□□□□ 0.74
CEP290O15078 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CEP290O15078 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.65■□□□□ 0.74
CEP290O15078 UGT1A2P-201ENST00000454886 866 ntBASIC19.65■□□□□ 0.74
CEP290O15078 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.65■□□□□ 0.74
CEP290O15078 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CEP290O15078 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 TEX21P-204ENST00000641479 1693 ntBASIC19.65■□□□□ 0.74
CEP290O15078 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CEP290O15078 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.64■□□□□ 0.74
CEP290O15078 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
CEP290O15078 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CEP290O15078 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CEP290O15078 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.64■□□□□ 0.74
CEP290O15078 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.64■□□□□ 0.74
CEP290O15078 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CEP290O15078 AL353135.1-201ENST00000606729 504 ntBASIC19.64■□□□□ 0.74
CEP290O15078 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CEP290O15078 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CEP290O15078 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CEP290O15078 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CEP290O15078 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CEP290O15078 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CEP290O15078 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CEP290O15078 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CEP290O15078 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.64■□□□□ 0.73
CEP290O15078 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.64■□□□□ 0.73
CEP290O15078 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.64■□□□□ 0.73
CEP290O15078 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.64■□□□□ 0.73
CEP290O15078 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.64■□□□□ 0.73
CEP290O15078 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CEP290O15078 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CEP290O15078 AL163051.1-201ENST00000569214 1512 ntBASIC19.64■□□□□ 0.73
CEP290O15078 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.63■□□□□ 0.73
CEP290O15078 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CEP290O15078 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.63■□□□□ 0.73
CEP290O15078 ADH5P3-201ENST00000433842 1137 ntBASIC19.63■□□□□ 0.73
CEP290O15078 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.63■□□□□ 0.73
CEP290O15078 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CEP290O15078 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CEP290O15078 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.63■□□□□ 0.73
CEP290O15078 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.63■□□□□ 0.73
CEP290O15078 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CEP290O15078 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CEP290O15078 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms