Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDH17O14917 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH17O14917 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH17O14917 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCDH17O14917 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 AC068880.1-201ENST00000507289 2297 ntBASIC17.45■□□□□ 0.38
PCDH17O14917 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH17O14917 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDH17O14917 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PCDH17O14917 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCDH17O14917 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDH17O14917 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH17O14917 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH17O14917 SEC1P-202ENST00000473944 940 ntBASIC17.44■□□□□ 0.38
PCDH17O14917 FAM86EP-206ENST00000510506 987 ntBASIC17.44■□□□□ 0.38
PCDH17O14917 AC104390.1-201ENST00000555663 520 ntBASIC17.44■□□□□ 0.38
PCDH17O14917 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH17O14917 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH17O14917 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.44■□□□□ 0.38
PCDH17O14917 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 AC126763.1-201ENST00000552015 2118 ntBASIC17.44■□□□□ 0.38
PCDH17O14917 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDH17O14917 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH17O14917 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PCDH17O14917 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDH17O14917 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDH17O14917 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH17O14917 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH17O14917 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDH17O14917 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH17O14917 KRT18P23-201ENST00000435622 1283 ntBASIC17.43■□□□□ 0.38
PCDH17O14917 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 KRT18P38-201ENST00000449496 1282 ntBASIC17.43■□□□□ 0.38
PCDH17O14917 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDH17O14917 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH17O14917 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH17O14917 MIR3917-201ENST00000580971 93 ntBASIC17.43■□□□□ 0.38
PCDH17O14917 AC024243.1-201ENST00000609234 778 ntBASIC17.43■□□□□ 0.38
PCDH17O14917 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDH17O14917 AC068587.9-201ENST00000641814 219 ntBASIC17.43■□□□□ 0.38
PCDH17O14917 LINC01311-201ENST00000565162 1445 ntBASIC17.43■□□□□ 0.38
PCDH17O14917 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 AC090340.1-201ENST00000620778 4980 ntBASIC17.43■□□□□ 0.38
PCDH17O14917 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PCDH17O14917 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDH17O14917 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH17O14917 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PCDH17O14917 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDH17O14917 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH17O14917 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH17O14917 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH17O14917 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH17O14917 PCED1CP-201ENST00000419887 785 ntBASIC17.42■□□□□ 0.38
PCDH17O14917 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH17O14917 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH17O14917 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH17O14917 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDH17O14917 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH17O14917 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDH17O14917 HYMAI.1-201ENST00000620949 238 ntBASIC17.42■□□□□ 0.38
PCDH17O14917 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms