Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
NTN3O00634 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NTN3O00634 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NTN3O00634 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
NTN3O00634 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.23■□□□□ 0.35
NTN3O00634 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NTN3O00634 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.23■□□□□ 0.35
NTN3O00634 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NTN3O00634 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.23■□□□□ 0.35
NTN3O00634 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.23■□□□□ 0.35
NTN3O00634 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.23■□□□□ 0.35
NTN3O00634 AC092865.5-201ENST00000545435 363 ntBASIC17.23■□□□□ 0.35
NTN3O00634 AC025062.2-201ENST00000605477 670 ntBASIC17.23■□□□□ 0.35
NTN3O00634 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.23■□□□□ 0.35
NTN3O00634 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NTN3O00634 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
NTN3O00634 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NTN3O00634 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.23■□□□□ 0.35
NTN3O00634 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 HLA-J-201ENST00000462773 1622 ntBASIC17.22■□□□□ 0.35
NTN3O00634 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.22■□□□□ 0.35
NTN3O00634 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.22■□□□□ 0.35
NTN3O00634 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NTN3O00634 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NTN3O00634 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.22■□□□□ 0.35
NTN3O00634 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.22■□□□□ 0.35
NTN3O00634 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NTN3O00634 OR7E14P-202ENST00000530490 1290 ntBASIC17.22■□□□□ 0.35
NTN3O00634 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.22■□□□□ 0.35
NTN3O00634 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.22■□□□□ 0.35
NTN3O00634 AP000867.4-201ENST00000641616 219 ntBASIC17.22■□□□□ 0.35
NTN3O00634 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.22■□□□□ 0.35
NTN3O00634 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.22■□□□□ 0.35
NTN3O00634 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NTN3O00634 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.21■□□□□ 0.35
NTN3O00634 AC097374.2-201ENST00000618617 1306 ntBASIC17.21■□□□□ 0.35
NTN3O00634 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.21■□□□□ 0.35
NTN3O00634 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.21■□□□□ 0.35
NTN3O00634 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
NTN3O00634 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.21■□□□□ 0.35
NTN3O00634 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 MIR940-201ENST00000401276 94 ntBASIC17.21■□□□□ 0.35
NTN3O00634 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 BX842568.4-201ENST00000421222 227 ntBASIC17.21■□□□□ 0.35
NTN3O00634 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.21■□□□□ 0.35
NTN3O00634 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.21■□□□□ 0.35
NTN3O00634 PGAM5P1-201ENST00000518923 814 ntBASIC17.21■□□□□ 0.35
NTN3O00634 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.21■□□□□ 0.35
NTN3O00634 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.21■□□□□ 0.35
NTN3O00634 AC012640.2-201ENST00000561606 901 ntBASIC17.21■□□□□ 0.35
NTN3O00634 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.21■□□□□ 0.35
NTN3O00634 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.21■□□□□ 0.35
NTN3O00634 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.21■□□□□ 0.35
NTN3O00634 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NTN3O00634 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NTN3O00634 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NTN3O00634 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NTN3O00634 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NTN3O00634 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NTN3O00634 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NTN3O00634 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NTN3O00634 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NTN3O00634 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
NTN3O00634 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NTN3O00634 FAM220CP-201ENST00000395253 831 ntBASIC17.2■□□□□ 0.34
NTN3O00634 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.2■□□□□ 0.34
NTN3O00634 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NTN3O00634 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.2■□□□□ 0.34
NTN3O00634 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.2■□□□□ 0.34
NTN3O00634 NKAPP1-205ENST00000585790 367 ntBASIC17.2■□□□□ 0.34
NTN3O00634 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NTN3O00634 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms