Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
O00370 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 NOC2LP2-201ENST00000407594 1944 ntBASIC19.47■□□□□ 0.71
O00370 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.47■□□□□ 0.71
O00370 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.47■□□□□ 0.71
O00370 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.47■□□□□ 0.71
O00370 PVRIG2P-201ENST00000435460 978 ntBASIC19.47■□□□□ 0.71
O00370 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.47■□□□□ 0.71
O00370 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.47■□□□□ 0.71
O00370 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.47■□□□□ 0.71
O00370 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.47■□□□□ 0.71
O00370 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
O00370 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
O00370 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.47■□□□□ 0.71
O00370 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.47■□□□□ 0.71
O00370 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
O00370 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
O00370 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.46■□□□□ 0.71
O00370 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.46■□□□□ 0.71
O00370 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
O00370 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 AC092647.4-201ENST00000457211 535 ntBASIC19.46■□□□□ 0.71
O00370 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.46■□□□□ 0.71
O00370 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.46■□□□□ 0.71
O00370 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
O00370 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
O00370 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
O00370 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.7
O00370 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 NOC2LP1-202ENST00000452600 2235 ntBASIC19.45■□□□□ 0.7
O00370 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.45■□□□□ 0.7
O00370 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
O00370 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
O00370 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.45■□□□□ 0.7
O00370 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
O00370 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.45■□□□□ 0.7
O00370 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 HYMAI.1-201ENST00000620949 238 ntBASIC19.45■□□□□ 0.7
O00370 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
O00370 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
O00370 AC135776.1-201ENST00000319817 2481 ntBASIC19.45■□□□□ 0.7
O00370 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.45■□□□□ 0.7
O00370 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.45■□□□□ 0.7
O00370 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
O00370 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
O00370 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.44■□□□□ 0.7
O00370 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.44■□□□□ 0.7
O00370 ESPNP-201ENST00000270691 2015 ntBASIC19.44■□□□□ 0.7
O00370 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
O00370 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
O00370 AL024508.2-201ENST00000607749 1894 ntBASIC19.44■□□□□ 0.7
O00370 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms