Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDC7O00311 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC7O00311 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.93■□□□□ 0.46
CDC7O00311 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC7O00311 MIR3180-4-201ENST00000582223 153 ntBASIC17.93■□□□□ 0.46
CDC7O00311 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.93■□□□□ 0.46
CDC7O00311 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDC7O00311 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC7O00311 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.93■□□□□ 0.46
CDC7O00311 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDC7O00311 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CDC7O00311 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.92■□□□□ 0.46
CDC7O00311 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 AC087499.1-201ENST00000418141 1075 ntBASIC17.92■□□□□ 0.46
CDC7O00311 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.92■□□□□ 0.46
CDC7O00311 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.92■□□□□ 0.46
CDC7O00311 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDC7O00311 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CDC7O00311 FLJ13224-201ENST00000313737 1514 ntBASIC17.92■□□□□ 0.46
CDC7O00311 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDC7O00311 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDC7O00311 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDC7O00311 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CDC7O00311 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CDC7O00311 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC7O00311 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.91■□□□□ 0.46
CDC7O00311 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.91■□□□□ 0.46
CDC7O00311 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC7O00311 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC7O00311 AC009065.1-201ENST00000564055 1225 ntBASIC17.91■□□□□ 0.46
CDC7O00311 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.91■□□□□ 0.46
CDC7O00311 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.91■□□□□ 0.46
CDC7O00311 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDC7O00311 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDC7O00311 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDC7O00311 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.9■□□□□ 0.46
CDC7O00311 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CDC7O00311 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDC7O00311 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDC7O00311 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 ECEL1P3-201ENST00000427961 737 ntBASIC17.9■□□□□ 0.46
CDC7O00311 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CDC7O00311 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.9■□□□□ 0.46
CDC7O00311 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.9■□□□□ 0.46
CDC7O00311 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.9■□□□□ 0.46
CDC7O00311 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.9■□□□□ 0.46
CDC7O00311 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms