Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
CHKB-CPT1BH3BT56 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
CHKB-CPT1BH3BT56 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 AC133637.1-201ENST00000624115 1537 ntBASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 TK2-202ENST00000417693 1046 ntTSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 MTX2-204ENST00000443241 799 ntTSL 3 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 Z92544.1-202ENST00000571933 1220 ntBASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 AL031595.1-201ENST00000623969 4709 ntBASIC10.14□□□□□ -0.79
CHKB-CPT1BH3BT56 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 LINC02199-201ENST00000506655 2702 ntBASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 STX4-202ENST00000394998 1498 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 MIR6722-201ENST00000617286 78 ntBASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms