Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LINC01546A6NGU7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.87□□□□□ -0.35
LINC01546A6NGU7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC12.87□□□□□ -0.35
LINC01546A6NGU7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LINC01546A6NGU7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 PCDHA1-201ENST00000378133 2726 ntBASIC12.86□□□□□ -0.35
LINC01546A6NGU7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 AL513477.1-201ENST00000602865 2407 ntBASIC12.86□□□□□ -0.35
LINC01546A6NGU7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 MIR149-201ENST00000384879 89 ntBASIC12.86□□□□□ -0.35
LINC01546A6NGU7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 AC005837.3-201ENST00000612163 286 ntBASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 LINC01451-201ENST00000623792 534 ntBASIC12.86□□□□□ -0.35
LINC01546A6NGU7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LINC01546A6NGU7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms