Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
BIVM-ERCC5R4GMW8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 SIGLEC16-201ENST00000599858 1437 ntBASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 AP000867.4-201ENST00000641616 219 ntBASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
BIVM-ERCC5R4GMW8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 RPSAP43-201ENST00000402237 625 ntBASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 HS6ST1P1-201ENST00000481504 1234 ntBASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 NKAPP1-205ENST00000585790 367 ntBASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC055717.3-201ENST00000622967 595 ntBASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
BIVM-ERCC5R4GMW8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC073621.1-201ENST00000392730 636 ntBASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC096633.1-201ENST00000422446 749 ntBASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 UPF3AP3-201ENST00000420996 769 ntBASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC093010.1-201ENST00000473625 1624 ntBASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 PCDHAC2-203ENST00000615316 3011 ntBASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 RPS2P28-201ENST00000314255 741 ntBASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 PMPCAP1-201ENST00000508114 1576 ntBASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC30.28■■■□□ 2.44
BIVM-ERCC5R4GMW8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC007967.2-201ENST00000432613 625 ntBASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BIVM-ERCC5R4GMW8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC30.26■■■□□ 2.44
BIVM-ERCC5R4GMW8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
BIVM-ERCC5R4GMW8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms